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Nucleic atom dist Protein atom
G27:C.N2/1 2.68 ASP156:A.OD2/1
C30:C.OP1/1 2.8 LYS36:A.NZ/1
C30:C.O2'/1 3.3 ASP126:A.OD2/1
G33:C.OP2/1 3.01 ARG96:B.NH1/1
C42:C.O2'/1 2.91 GLN66:B.NE2/1
C42:C.O2'/1 2.53 LYS67:B.O/1
C42:C.O2/1 2.67 THR93:B.N/1
C42:C.N3/1 2.63 THR93:B.OG1/1
C43:C.O2/1 2.76 ARG95:B.NE/1
C43:C.O2/1 2.84 ARG95:B.NH2/1
G44:C.OP1/1 2.95 ARG98:B.NH2/1
A45:C.OP1/1 3.07 ARG96:B.NE/1
A45:C.OP2/1 2.77 ARG96:B.NH2/1
U55:C.O2'/1 2.75 ASP126:A.O/1
G56:C.O2'/1 2.58 ASN132:A.ND2/1
A29:D.OP1/1 2.73 ARG91:B.NH1/1
C30:D.OP1/1 2.6 LYS36:B.NZ/1
G33:D.OP2/1 2.97 ARG96:A.NH1/1
C42:D.O2'/1 2.82 GLN66:A.NE2/1
C42:D.O2'/1 2.52 LYS67:A.O/1
C42:D.O2/1 2.59 THR93:A.N/1
C42:D.N3/1 2.58 THR93:A.OG1/1
C42:D.N4/1 3.37 ARG91:A.NH2/1
C43:D.O2/1 2.84 ARG95:A.NE/1
C43:D.O2/1 2.81 ARG95:A.NH2/1
G44:D.OP1/1 2.98 ARG98:A.NH2/1
A45:D.OP1/1 3.04 ARG96:A.NE/1
A45:D.OP2/1 2.71 ARG96:A.NH2/1
U55:D.O2'/1 2.76 ASP126:B.O/1
G56:D.O2'/1 2.79 SER124:B.O/1
G56:D.O2'/1 3.13 ASN132:B.ND2/1
G56:D.N3/1 3.39 ASN132:B.ND2/1
C57:D.OP1/1 2.92 SER124:B.OG/1
G58:D.O2'/1 2.86 ASP156:B.OD1/1
G58:D.O2'/1 3.06 ASP156:B.OD2/1
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Nucleic atom d_n2w water d_p2w Protein atom
C30:C.O2'/1 2.9 105:C/1 2.98 ASP126:A.O/1
C43:C.OP1/1 2.63 102:C/1 3.16 LYS67:B.N/1
C43:C.O2'/1 2.92 202:B/1 2.62 GLN66:B.OE1/1
C43:C.O2'/1 2.92 202:B/1 3.08 THR93:B.O/1
C43:C.O2'/1 2.92 202:B/1 2.94 ARG95:B.N/1
C43:C.O2'/1 2.92 202:B/1 3.25 ARG98:B.NH2/1
C43:D.O2'/1 2.93 201:A/1 2.66 GLN66:A.OE1/1
C43:D.O2'/1 2.93 201:A/1 3.13 THR93:A.O/1
C43:D.O2'/1 2.93 201:A/1 3.03 ARG95:A.N/1
C43:D.O2'/1 2.93 201:A/1 3.17 ARG98:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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