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Nucleic atom dist Protein atom
DT5:C.OP1/1 2.61 SER166:A.OG/1
DT5:C.OP2/1 2.69 LEU167:A.N/1
DG6:C.OP1/1 2.96 THR150:A.OG1/1
DG6:C.OP1/1 3.12 HIS152:A.NE2/1
DG6:C.O6/1 3 ARG124:A.NH2/1
DC8:C.N4/1 3.06 ASP154:A.OD1/1
DC8:C.N4/1 2.92 ASP154:A.OD2/1
DG9:C.OP2/1 2.66 HIS156:A.NE2/1
DG10:C.N7/1 2.95 ARG157:A.NH1/1
DG10:C.O6/1 2.65 ARG157:A.NH2/1
DA13:C.OP2/1 3.05 LYS43:A.NZ/1
DA14:C.OP2/1 2.6 LYS43:A.N/1
DA14:C.N7/1 2.6 THR76:A.OG1/1
DA14:C.N6/1 3.01 THR76:A.OG1/1
DG15:C.OP2/1 3.07 GLY20:A.O/1
DG15:C.N7/1 3.05 ARG77:A.NE/1
DT16:C.OP2/1 2.58 TYR25:A.OH/1
DC18:C.N4/1 3.39 TYR29:A.OH/1
DC18:C.N4/1 3.12 ARG37:A.NH1/1
DG20:C.OP2/1 2.45 LYS30:A.NZ/1
DG21:C.N7/1 3.14 ARG33:A.NH1/1
DG21:C.O6/1 2.33 ARG33:A.NH1/1
DG4:D.OP1/1 2.64 LYS85:A.NZ/1
DG4:D.OP2/1 2.61 SER34:A.OG/1
DG4:D.OP2/1 3.16 TYR36:A.OH/1
DG4:D.N7/1 3.24 SER34:A.N/1
DC5:D.OP2/1 2.9 LYS85:A.N/1
DC5:D.N4/1 3.02 SER34:A.O/1
DC6:D.OP2/1 3.19 LYS68:A.N/1
DC6:D.N4/1 2.98 GLU35:A.OE1/1
DG7:D.O6/1 2.92 ARG37:A.NH2/1
DG8:D.N7/1 3.1 ARG81:A.NH1/1
DG8:D.N7/1 3.17 ARG81:A.NH2/1
DG8:D.O6/1 3 ARG37:A.NH2/1
DA9:D.N6/1 3.12 GLU79:A.OE1/1
DA9:D.N6/1 3.16 ARG81:A.NH2/1
DC11:D.N4/1 2.99 ASP75:A.OD1/1
DC11:D.N4/1 3.1 ASP75:A.OD2/1
DA14:D.OP2/1 3.34 LYS130:A.NZ/1
DC15:D.OP1/1 2.97 GLU117:A.OE2/1
DC15:D.OP1/1 3.21 ASN129:A.ND2/1
DC15:D.OP2/1 2.71 LYS130:A.N/1
DC15:D.N4/1 2.6 ASP155:A.OD2/1
DC17:D.OP2/1 2.85 LYS120:A.N/1
DG18:D.N7/1 3.06 ARG126:A.NH2/1
DG18:D.O6/1 2.71 ARG126:A.NH1/1
DG19:D.O6/1 2.77 ARG124:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT5:C.OP2/1 2.74 105:C/1 3.32 ASN164:A.ND2/1
DG9:C.O6/1 2.62 104:C/1 3.41 ARG157:A.NH2/1
DA14:C.OP2/1 3.02 337:A/1 3.01 SER44:A.N/1
DG15:C.OP2/1 2.53 304:A/1 2.26 ASP21:A.OD1/1
DG15:C.OP2/1 2.53 304:A/1 2.28 GLU117:A.OE1/1
DT17:C.O4/1 2.87 310:A/1 2.95 ARG37:A.NH1/1
DT17:C.O4/1 2.87 310:A/1 2.56 GLU79:A.OE2/1
DC5:D.OP1/1 2.34 104:D/1 3.1 LYS86:A.N/1
DC5:D.OP2/1 2.64 108:D/1 3.02 TYR36:A.N/1
DC5:D.OP2/1 2.64 108:D/1 2.75 SER83:A.OG/1
DG7:D.N7/1 2.74 109:D/1 2.91 GLU35:A.OE2/1
DG7:D.N7/1 2.74 109:D/1 3.41 ARG37:A.NH2/1
DG7:D.N7/1 2.74 109:D/1 2.97 GLN70:A.NE2/1
DG7:D.N7/1 2.74 109:D/1 2.99 ARG81:A.NH1/1
DG8:D.OP2/1 3 117:D/1 3.08 LYS73:A.N/1
DA9:D.N7/1 2.88 312:A/1 2.86 ARG77:A.NH1/1
DA9:D.N7/1 2.88 312:A/1 2.89 ARG77:A.NH2/1
DA9:D.N7/1 2.88 312:A/1 2.57 GLU79:A.OE1/1
DC16:D.OP2/1 2.38 304:A/1 2.26 ASP21:A.OD1/1
DC16:D.OP2/1 2.38 304:A/1 2.28 GLU117:A.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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