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Nucleic atom dist Protein atom
DT5:G.OP1/1 2.61 SER166:F.OG/1
DT5:G.OP2/1 2.82 LEU167:F.N/1
DG6:G.OP1/1 2.68 THR150:F.OG1/1
DG6:G.OP1/1 2.88 HIS152:F.NE2/1
DG6:G.N7/1 3.1 ARG124:F.NH2/1
DG6:G.O6/1 3.14 ARG124:F.NH2/1
DC7:G.N4/1 3.45 ARG124:F.NH2/1
DC8:G.N4/1 3.05 ASP154:F.OD1/1
DG10:G.N7/1 2.85 ARG157:F.NH1/1
DG10:G.O6/1 2.49 ARG157:F.NH2/1
DA14:G.OP1/1 3.24 GLN42:F.NE2/1
DA14:G.OP2/1 2.66 LYS43:F.N/1
DA14:G.N7/1 2.58 THR76:F.OG1/1
DA14:G.N6/1 2.71 THR76:F.OG1/1
DG15:G.OP2/1 2.88 GLY20:F.O/1
DG15:G.N7/1 2.97 ARG77:F.NE/1
DG15:G.O6/1 3.23 ARG77:F.NE/1
DT16:G.OP2/1 2.5 TYR25:F.OH/1
DC18:G.N4/1 3.35 TYR29:F.OH/1
DG21:G.N7/1 3.4 ARG33:F.NH1/1
DG4:I.OP1/1 2.57 LYS85:F.NZ/1
DG4:I.OP2/1 2.6 SER34:F.OG/1
DG4:I.OP2/1 2.76 TYR36:F.OH/1
DG4:I.N7/1 3.28 SER34:F.N/1
DC5:I.OP2/1 3.02 LYS85:F.N/1
DC5:I.N4/1 3.15 SER34:F.O/1
DC6:I.OP2/1 2.84 LYS68:F.N/1
DC6:I.N4/1 3.14 GLU35:F.OE1/1
DG7:I.OP2/1 2.72 LYS68:F.NZ/1
DG8:I.N7/1 3.3 ARG81:F.NH1/1
DG8:I.N7/1 3.4 ARG81:F.NH2/1
DG8:I.O6/1 2.86 ARG37:F.NH1/1
DG8:I.O6/1 2.92 ARG37:F.NH2/1
DA9:I.N6/1 3.28 GLU79:F.OE1/1
DC11:I.N4/1 2.9 ASP75:F.OD2/1
DA14:I.OP2/1 3.23 HIS158:F.ND1/1
DC15:I.OP1/1 2.9 GLU117:F.OE2/1
DC15:I.OP1/1 3.22 ASN129:F.ND2/1
DC15:I.OP2/1 2.74 LYS130:F.N/1
DC15:I.N4/1 2.57 ASP155:F.OD2/1
DC16:I.OP2/1 2.99 ALA116:F.O/1
DC17:I.OP1/1 2.47 LYS120:F.NZ/1
DC17:I.OP2/1 3.05 LYS120:F.N/1
DG18:I.N7/1 2.99 ARG126:F.NH2/1
DG18:I.O6/1 2.78 ARG126:F.NH1/1
DG19:I.O6/1 2.83 ARG124:F.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT4:G.OP1/1 2.62 204:G/1 3.03 LEU167:F.O/1
DT5:G.OP2/1 2.63 205:G/1 3.4 ASN164:F.ND2/1
DC7:G.N4/1 3.23 341:F/1 3.2 ARG126:F.NH1/1
DG11:G.O6/1 2.79 313:F/1 2.61 HIS158:F.NE2/1
DG15:G.OP2/1 2.32 303:F/1 2.13 ASP21:F.OD1/1
DG15:G.OP2/1 2.32 303:F/1 2.31 GLU117:F.OE1/1
DT17:G.O4/1 2.75 323:F/1 2.8 ARG37:F.NH1/1
DT17:G.O4/1 2.75 323:F/1 2.74 GLU79:F.OE2/1
DC3:I.N4/1 3.22 334:F/1 3.09 GLY31:F.O/1
DC5:I.OP1/1 2.45 105:I/1 3.01 LYS86:F.N/1
DC5:I.OP2/1 2.47 107:I/1 2.98 TYR36:F.N/1
DC5:I.OP2/1 2.47 107:I/1 3.04 SER83:F.OG/1
DC6:I.OP2/1 2.95 301:F/1 1.83 LYS68:F.O/1
DG7:I.N7/1 2.84 321:F/1 2.73 GLU35:F.OE2/1
DG7:I.N7/1 2.84 321:F/1 3.32 GLN70:F.NE2/1
DG7:I.N7/1 2.84 321:F/1 2.97 ARG81:F.NH1/1
DC16:I.OP2/1 2.43 303:F/1 2.13 ASP21:F.OD1/1
DC16:I.OP2/1 2.43 303:F/1 2.31 GLU117:F.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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