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Nucleic atom dist Protein atom
DT6:N.OP1/1 3.27 LYS427:B.NZ/1
DT39:N.OP1/1 2.52 THR111:E.OG1/1
U33:P.O2'/1 2.58 ARG619:Z.NE/1
U33:P.O2'/1 2.98 ARG619:Z.NH2/1
A36:P.O3'/1 2.86 LYS579:Z.NZ/1
C37:P.OP2/1 2.12 LYS579:Z.NZ/1
U39:P.O3'/1 3.19 ARG890:B.NH2/1
A40:P.OP1/1 3.11 VAL265:A.O/1
A40:P.OP1/1 3.25 GLN267:A.OE1/1
G48:P.O3'/1 2.97 GLN731:B.NE2/1
G48:P.O2'/1 2.83 GLN731:B.NE2/1
C50:P.OP1/1 2.35 LYS942:B.NZ/1
C50:P.O3'/1 2.8 ASP499:A.OD1/1
C50:P.O2'/1 2.42 ARG460:A.NH2/1
C50:P.O2'/1 2.84 ASP499:A.OD1/1
DT18:T.OP1/1 2.69 GLU1433:A.O/1
DA19:T.OP1/1 3.36 ARG351:A.NH1/1
DG21:T.OP2/1 2.38 LYS346:A.NZ/1
DG21:T.N2/1 3.4 GLN461:A.O/1
DC22:T.OP1/1 2.93 ARG1085:B.NE/1
DC23:T.OP1/1 2.52 ARG358:A.NH1/1
DC23:T.OP1/1 3.25 ARG1085:B.N/1
DC23:T.OP2/1 3.47 ARG358:A.NH2/1
DG26:T.OP1/1 3.19 ARG897:B.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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