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Nucleic atom dist Protein atom
C3:B.O3'/1 2.79 ASN222:A.ND2/1
C3:B.O2'/1 3.44 ASN222:A.ND2/1
G12:B.O2'/1 2.68 ALA649:A.O/1
A14:B.OP1/1 3.26 ASN723:A.ND2/1
A15:B.OP1/1 3.04 ARG719:A.NH2/1
U16:B.O4'/1 3.42 ARG719:A.NH2/1
U16:B.O4/1 2.85 LYS711:A.NZ/1
U20:B.O2/1 2.7 LYS813:A.NZ/1
A22:B.O2'/1 2.84 GLU731:A.OE2/1
A24:B.OP1/1 2.9 ASN734:A.ND2/1
C25:B.OP1/1 2.99 ARG668:A.NE/1
C25:B.OP1/1 3.05 ARG668:A.NH2/1
A26:B.OP2/1 2.8 ARG668:A.NH2/1
G47:B.OP1/1 3.08 LYS837:A.NZ/1
C47:B.OP1/1 3.18 ARG811:A.NH2/1
C47:B.OP2/1 2.85 ARG811:A.NH1/1
U47:B.OP2/1 3.21 LYS809:A.NZ/1
C56:B.O2'/1 3.08 ASN856:A.ND2/1
C56:B.O2/1 3 ASN856:A.ND2/1
G70:B.OP1/1 3.09 LYS619:A.N/1
G71:B.OP1/1 2.68 LYS619:A.NZ/1
A73:B.OP2/1 3.35 GLU292:A.N/1
A73:B.O2'/1 2.92 ARG418:A.NH2/1
A73:B.N6/1 3.11 ARG416:A.O/1
C74:B.OP2/1 2.72 ARG424:A.NH2/1
C74:B.O4'/1 3.26 ARG424:A.NE/1
C74:B.O2'/1 2.72 ASN168:A.N/1
C74:B.O2'/1 2.72 ASN168:A.OD1/1
C74:B.O2/1 3.48 ARG426:A.NH2/1
C74:B.N4/1 2.7 GLN190:A.OE1/1
C74:B.N4/1 3.03 GLN425:A.OE1/1
C75:B.OP2/1 3.17 GLU169:A.N/1
C75:B.N3/1 3.34 LYS619:A.NZ/1
A76:B.OP1/1 2.7 LEU84:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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