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Nucleic atom dist Protein atom
DG6:C.OP1/1 2.83 THR473:A.N/1
DG6:C.OP2/1 2.7 THR473:A.OG1/1
DG7:C.OP2/1 2.69 ALA471:A.N/1
DA8:C.OP2/1 3.08 THR469:A.N/1
DG11:C.OP1/1 2.68 THR361:A.N/1
DG11:C.OP1/1 2.66 THR361:A.OG1/1
DG11:C.OP2/1 3.33 VAL360:A.N/1
DA12:C.OP1/1 3.01 GLY356:A.N/1
DA12:C.OP1/1 2.93 ILE357:A.O/1
DC13:C.OP1/1 2.89 GLU199:A.OE1/1
DC13:C.OP1/1 2.55 LYS321:A.NZ/1
DC13:C.O3'/1 2.55 SER196:A.OG/1
DA4:D.OP1/1 2.4 ARG507:A.NH2/1
DA4:D.N6/1 2.68 THR44:A.OG1/1
DT7:D.OP2/1 2.68 GLU419:A.N/1
DT7:D.OP2/1 3.09 GLU419:A.O/1
DC8:D.OP1/1 2.85 ARG413:A.NH1/1
DC8:D.OP2/1 2.58 SER417:A.N/1
DC8:D.OP2/1 2.82 SER417:A.OG/1
DG9:D.OP1/1 2.63 LYS414:A.N/1
DG9:D.OP1/1 3.16 SER415:A.N/1
DG9:D.OP2/1 2.57 SER415:A.OG/1
DA10:D.OP2/1 2.98 LYS414:A.NZ/1
DC12:D.OP1/1 2.52 SER388:A.OG/1
DC12:D.OP1/1 2.63 THR390:A.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT5:D.OP1/1 3.08 702:A/1 2.54 THR421:A.OG1/1
DT5:D.OP1/1 3.08 702:A/1 2.93 LYS461:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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