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Nucleic atom dist Protein atom
DG6:P.OP1/1 2.68 THR473:B.N/1
DG6:P.OP2/1 2.95 THR473:B.OG1/1
DG7:P.OP2/1 2.57 ALA471:B.N/1
DA8:P.OP2/1 2.81 THR469:B.N/1
DA8:P.OP2/1 3.11 THR469:B.OG1/1
DG11:P.OP1/1 3.12 GLY358:B.N/1
DG11:P.OP1/1 2.89 THR361:B.N/1
DG11:P.OP1/1 2.67 THR361:B.OG1/1
DG11:P.OP2/1 3.12 VAL360:B.N/1
DA12:P.OP1/1 3.04 GLY356:B.N/1
DA12:P.OP1/1 2.97 ILE357:B.O/1
DC13:P.OP1/1 2.81 GLU199:B.OE2/1
DC13:P.OP1/1 2.74 LYS321:B.NZ/1
DA4:T.OP1/1 2.12 ARG507:B.NH2/1
DA4:T.N6/1 2.67 THR44:B.OG1/1
DT7:T.OP2/1 2.75 GLU419:B.N/1
DC8:T.OP1/1 2.59 ARG413:B.NH1/1
DC8:T.OP2/1 2.71 SER417:B.N/1
DC8:T.OP2/1 2.84 SER417:B.OG/1
DG9:T.OP1/1 2.75 LYS414:B.N/1
DG9:T.OP2/1 2.8 SER415:B.OG/1
DA10:T.OP2/1 3.13 LYS414:B.NZ/1
DC12:T.OP1/1 2.33 SER388:B.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT5:T.OP1/1 2.95 702:B/1 2.7 THR421:B.OG1/1
DT5:T.OP1/1 2.95 702:B/1 2.8 LYS461:B.NZ/1
DT5:T.OP1/1 2.95 702:B/1 3.18 ARG507:B.NH1/1
DT5:T.OP2/1 2.99 101:T/1 3.07 LYS461:B.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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