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Nucleic atom dist Protein atom
DA2:G.N6/1 3.17 GLU243:F.OE2/1
DA4:G.OP2/1 2.87 LYS249:F.N/1
DA4:G.OP2/1 3.04 THR252:F.OG1/1
DA5:G.N7/1 3.2 SER251:F.O/1
DT6:G.O2/1 3.1 LEU209:F.N/1
DT6:G.N3/1 2.94 ASN206:F.OD1/1
DG8:G.OP1/1 3.23 LYS215:F.NZ/1
DG8:G.N2/1 3.09 ASP94:F.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA5:G.OP1/1 2.68 102:G/1 2.87 LYS249:F.NZ/1
DG7:G.N7/1 3.12 504:F/1 2.43 GLY104:F.O/1
DG7:G.N7/1 3.12 504:F/1 2.23 ARG208:F.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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