Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
A1:K.O2'/1 2.57 TYR137:N.OH/1
U2:K.OP1/1 2.21 ARG47:N.NH2/1
U2:K.OP2/1 2.89 ARG47:N.NH1/1
U2:K.O2'/1 2.97 GLY139:N.O/1
U2:K.O2/1 2.97 GLY139:N.N/1
U2:K.N3/1 2.35 TYR137:N.O/1
U2:K.O4/1 2.43 TYR137:N.N/1
U2:K.O4/1 2.98 TYR137:N.O/1
G3:K.OP1/1 2.7 SER33:N.OG/1
G3:K.OP2/1 2.31 ARG212:N.NH2/1
G3:K.OP2/1 2.46 TYR214:N.OH/1
G3:K.O5'/1 3.1 ARG212:N.NH2/1
G3:K.O2'/1 2.79 SER19:N.O/1
G3:K.O6/1 2.95 ASN201:N.ND2/1
G4:K.OP1/1 2.92 ARG140:N.NE/1
G4:K.N2/1 2.79 ARG47:N.NH2/1
G4:K.N3/1 3.39 ARG47:N.NH2/1
A5:K.OP1/1 3.17 ARG141:N.N/1
A5:K.O3'/1 3.14 ARG141:N.NH1/1
A5:K.O2'/1 2.98 VAL182:D.O/1
A5:K.O2'/1 2.2 ASP183:D.OD1/1
C6:K.OP1/1 2.71 ARG141:N.NH1/1
C6:K.O2/1 3.08 ARG172:D.NE/1
C6:K.O2/1 2.54 ARG172:D.NH1/1
C6:K.N3/1 3.22 HIS167:C.NE2/1
C7:K.OP1/1 2.31 ARG48:D.NH1/1
C7:K.O2/1 3.37 TRP163:C.NE1/1
C7:K.O2/1 2.97 HIS74:N.NE2/1
C7:K.O2/1 3.17 ARG105:N.NH2/1
C7:K.N3/1 3.17 ARG105:N.NH2/1
G8:K.OP1/1 2.8 GLY77:N.N/1
G8:K.OP2/1 3.03 ARG45:D.NH1/1
G8:K.O4'/1 2.52 ARG45:D.NH1/1
G8:K.N2/1 2.63 THR75:N.OG1/1
G8:K.N3/1 3.3 THR75:N.OG1/1
C9:K.OP1/1 2.33 LYS26:D.NZ/1
C9:K.OP1/1 2.81 GLN41:D.NE2/1
C9:K.OP2/1 3 THR75:N.N/1
C10:K.OP2/1 2.97 ILE17:D.O/1
C10:K.O2'/1 2.5 ARG19:D.NH2/1
A11:K.OP1/1 2.9 LYS271:D.N/1
A11:K.OP2/1 3 LYS271:D.N/1
A11:K.O2'/1 2.44 GLU181:H.OE2/1
G12:K.OP1/1 2.92 ASN273:D.OD1/1
U13:K.OP1/1 2.74 LYS44:H.NZ/1
G14:K.OP1/1 2.81 VAL207:D.N/1
A15:K.OP1/1 3.05 LYS26:H.NZ/1
A15:K.OP1/1 3.28 SER39:H.OG/1
A15:K.OP1/1 2.45 GLN41:H.NE2/1
A15:K.OP2/1 2.75 THR205:D.N/1
A15:K.O5'/1 3.05 LYS26:H.NZ/1
U16:K.OP2/1 3.15 ARG19:H.N/1
A17:K.OP1/1 2.78 LYS271:H.N/1
A17:K.OP2/1 2.89 ARG19:H.NH2/1
A17:K.N3/1 3.15 HIS216:D.ND1/1
A18:K.OP1/1 3.08 ASN273:H.OD1/1
G19:K.OP1/1 3.37 LYS44:G.NZ/1
G19:K.O2'/1 3.19 THR205:H.O/1
U20:K.OP1/1 2.35 VAL207:H.N/1
G21:K.OP1/1 2.73 LYS26:G.NZ/1
G21:K.OP1/1 3.02 SER39:G.OG/1
G21:K.OP1/1 2.49 GLN41:G.NE2/1
G21:K.OP2/1 2.72 THR205:H.N/1
G22:K.OP2/1 2.78 ARG19:G.N/1
A23:K.OP1/1 2.6 LYS271:G.N/1
A23:K.OP2/1 3.23 ARG19:G.NH2/1
A24:K.OP1/1 2.88 ASN273:G.OD1/1
U25:K.OP1/1 3.03 LYS44:F.NZ/1
U25:K.O2'/1 2.69 THR205:G.O/1
G26:K.OP1/1 2.62 VAL207:G.N/1
C27:K.OP1/1 3.13 SER39:F.OG/1
C27:K.OP1/1 3.08 GLN41:F.NE2/1
C27:K.OP2/1 2.5 THR205:G.N/1
C28:K.OP2/1 3.19 ILE17:F.O/1
C28:K.OP2/1 3 ARG19:F.N/1
C28:K.O2'/1 3.2 HIS216:G.NE2/1
C28:K.O2/1 2.88 HIS216:G.O/1
A29:K.OP1/1 2.69 LYS271:F.N/1
A29:K.OP2/1 3.03 ARG19:F.NH2/1
U30:K.OP1/1 2.77 ASN273:F.OD1/1
G31:K.O2'/1 2.21 THR205:F.O/1
U32:K.O2/1 3.23 ARG45:E.NH2/1
G33:K.OP1/1 2.67 LYS26:E.NZ/1
G33:K.OP1/1 2.66 GLN41:E.NE2/1
G33:K.OP2/1 2.82 THR205:F.N/1
G33:K.N2/1 2.34 GLY219:F.O/1
G34:K.OP1/1 2.67 ASN18:E.OD1/1
G34:K.OP2/1 3 ILE17:E.O/1
G34:K.OP2/1 2.84 ASN18:E.OD1/1
G34:K.N2/1 2.35 HIS216:F.O/1
G35:K.OP1/1 2.35 LYS271:E.N/1
G35:K.N3/1 3.14 HIS216:F.NE2/1
U37:K.O3'/1 2.86 THR205:E.O/1
U37:K.O2'/1 3.07 THR205:E.O/1
G38:K.OP1/1 2.43 VAL207:E.N/1
U39:K.OP1/1 2.78 GLN41:I.NE2/1
U39:K.OP2/1 2.82 THR205:E.N/1
U39:K.N3/1 3.37 GLY219:E.O/1
C40:K.OP2/1 3.38 ARG19:I.N/1
G45:K.O2'/1 2.76 ARG123:A.O/1
C46:K.OP2/1 2.65 ARG116:A.NH1/1
C51:K.O2'/1 2.93 ASN44:A.ND2/1
U57:K.OP2/1 2.54 ARG113:A.N/1
G58:K.OP2/1 3.22 ARG152:A.NH2/1
G58:K.OP2/1 3.02 ARG212:A.NH1/1
G58:K.OP2/1 3.26 ARG212:A.NH2/1
G58:K.O2'/1 2.4 ASN44:A.O/1
G58:K.O2'/1 2.83 PRO45:A.O/1
G58:K.N7/1 3.29 ARG113:A.NH2/1
G58:K.O6/1 2.49 ARG113:A.NH2/1
G59:K.OP1/1 2.7 ARG46:A.NE/1
G59:K.OP1/1 3.31 LYS214:A.NZ/1
G59:K.O6/1 2.23 ARG123:A.NH2/1
G60:K.OP2/1 2.97 LYS214:A.NZ/1
G60:K.O6/1 2.71 ARG123:A.NH1/1
G61:K.OP1/1 2.98 HIS27:A.NE2/1
G61:K.N2/1 2.95 ARG181:A.NH1/1
DT34:M.O3'/1 2.85 GLU176:G.OE2/1
DT35:M.OP1/1 2.94 LYS97:G.NZ/1
DA36:M.OP1/1 2.6 LYS96:G.NZ/1
DC40:M.OP1/1 2.61 SER114:H.OG/1
DT41:M.O3'/1 3.23 LYS97:N.NZ/1
DG42:M.O3'/1 2.54 LYS98:N.NZ/1
DG43:M.N2/1 2.75 THR100:N.OG1/1
DG43:M.N3/1 2.31 THR100:N.OG1/1
DC44:M.O4'/1 2.57 ARG386:C.NE/1
DT45:M.OP1/1 2.6 GLU159:C.OE2/1
DT45:M.OP1/1 3.31 ARG94:N.NH2/1
DT46:M.OP2/1 2.81 GLU159:C.OE2/1
DT46:M.O2/1 2.96 ARG208:C.NE/1
DC47:M.O2/1 2.5 ARG208:C.NH2/1
DA10:O.O3'/1 2.68 ASN209:C.ND2/1
DG11:O.O3'/1 2.47 ARG303:C.NH2/1
DG11:O.N2/1 2.59 GLN384:C.OE1/1
DC12:O.OP2/1 2.5 ARG303:C.NH1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text