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Nucleic atom dist Protein atom
DG1:D.OP1/1 3.18 LYS68:A.NZ/1
DT2:D.OP1/1 2.76 GLY66:A.N/1
DT2:D.OP1/1 2.92 ILE69:A.N/1
DT2:D.OP2/1 3.04 LYS68:A.N/1
DC3:D.OP1/1 2.82 GLY64:A.N/1
DC8:P.OP1/1 3.04 GLY107:A.N/1
DC8:P.OP1/1 2.92 ALA110:A.N/1
DC8:P.OP2/1 3.05 SER109:A.N/1
DG9:P.OP1/1 2.74 GLY105:A.N/1
DC10:P.OP1/1 2.89 ARG254:A.NH2/1
DG9:T.N3/1 3.31 LYS234:A.NZ/1
DC10:T.OP1/1 2.94 THR233:A.N/1
DC10:T.OP1/1 2.85 LYS234:A.N/1
DA11:T.OP1/1 2.98 LYS230:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG1:D.OP1/1 2.69 106:D/1 2.95 LYS35:A.NZ/1
DG1:D.OP2/1 2.66 509:A/1 2.48 LYS72:A.NZ/1
DG7:P.OP1/1 2.8 213:P/1 2.81 SER109:A.OG/1
DG7:P.OP1/1 2.8 213:P/1 2.84 SER109:A.OG/1
DG9:P.OP2/1 2.73 209:P/1 3.13 THR101:A.O/1
DG9:P.N2/1 3.02 574:A/1 3.46 LYS234:A.NZ/1
DG9:P.N2/1 3.02 574:A/1 2.77 ARG258:A.NH2/1
DG9:P.N3/1 2.86 217:P/1 3.17 LYS234:A.NZ/1
DC10:P.OP1/1 2.9 545:A/1 2.69 SER104:A.OG/1
DC10:P.OP1/1 2.66 207:P/1 2.82 ASP190:A.OD2/1
DC10:P.OP1/1 2.9 545:A/1 2.79 ARG254:A.NE/1
DC10:P.O3'/1 3.01 508:A/1 2.61 ASP190:A.OD2/1
DG6:T.OP1/1 2.8 573:A/1 2.77 HIS34:A.ND1/1
DG6:T.OP1/1 2.8 573:A/1 2.91 ASN37:A.ND2/1
DG6:T.OP2/1 2.8 116:T/1 3.11 LYS280:A.NZ/1
DG6:T.N7/1 3.46 612:A/1 2.88 ASN37:A.ND2/1
DG9:T.O4'/1 2.98 580:A/1 2.77 LYS234:A.NZ/1
DC10:T.OP2/1 2.74 109:T/1 2.93 GLU232:A.N/1
DA11:T.OP2/1 2.55 102:T/1 2.76 LYS230:A.O/1
DA11:T.O3'/1 3.1 115:T/1 2.97 HIS135:A.N/1
DT12:T.OP1/1 2.46 101:T/1 2.92 HIS134:A.N/1
DT12:T.OP1/1 2.78 115:T/1 2.97 HIS135:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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