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Nucleic atom dist Protein atom
DT1:H.O5'/1 2.44 GLN353:F.OE1/1
DA4:H.OP2/1 3.25 LYS342:F.N/1
DA4:H.N7/1 3.1 THR345:F.OG1/1
DA5:H.OP2/1 2.62 SER344:F.OG/1
DT6:H.N3/1 2.56 ASN299:F.OD1/1
DA10:H.N6/1 3.28 ARG305:C.NH1/1
DC12:H.OP1/1 2.54 ARG389:D.NH1/1
DT13:H.O2/1 2.59 TRP211:C.NE1/1
DG14:H.N2/1 2.79 ASP371:C.OD1/1
DT15:H.OP2/1 2.63 ARG467:C.NE/1
DC18:H.O3'/1 2.44 ARG1038:D.NH1/1
DA21:H.OP2/1 3.1 LYS294:D.NZ/1
DG12:G.OP1/1 3.25 GLU1228:D.N/1
DA13:G.OP1/1 3.02 ARG414:D.NH1/1
DG14:G.OP1/1 2.81 LYS409:D.NZ/1
DG14:G.O4'/1 3.25 THR867:D.O/1
DT15:G.OP2/1 2.4 LYS409:D.NZ/1
DC16:G.OP1/1 3.03 ARG1067:C.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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