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Nucleic atom dist Protein atom
DC3:A.OP1/1 3.21 GLY234:Z.N/1
DC3:A.OP1/1 2.6 LYS237:Z.N/1
DT4:A.OP1/1 2.82 GLY232:Z.N/1
DT4:A.OP1/1 3.01 ILE233:Z.N/1
DT4:A.OP2/1 3.17 ILE233:Z.O/1
DA5:A.OP1/1 2.29 ARG231:Z.NH2/1
DG9:A.N7/1 2.97 ARG121:Z.NH1/1
DG9:A.O6/1 3.1 ARG121:Z.NH2/1
DC11:A.N3/1 3.15 ARG116:Z.NH1/1
DC1:B.OP2/1 2.98 ASP171:Z.OD2/1
DG2:B.OP1/1 3.29 SER172:Z.N/1
DG2:B.OP1/1 2.73 SER172:Z.OG/1
DG2:B.O3'/1 3.13 LYS185:Z.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA10:A.N6/1 3.24 546:Z/1 3.08 ARG121:Z.NH1/1
DA3:B.OP2/1 2.55 101:B/1 2.77 GLN8:Z.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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