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Nucleic atom dist Protein atom
DG6:T.N7/1 2.58 LYS280:A.NZ/1
DG6:T.N2/1 3.24 ARG283:A.NH1/1
DG6:T.N3/1 3.32 ARG283:A.NH1/1
DA7:T.OP1/1 2.68 THR292:A.OG1/1
DC8:T.OP1/1 2.83 ASN294:A.ND2/1
DG9:T.OP1/1 2.65 TYR296:A.OH/1
DG9:T.N3/1 2.92 LYS234:A.NZ/1
DC10:T.OP1/1 3.04 THR233:A.N/1
DC10:T.OP1/1 2.87 LYS234:A.N/1
DA11:T.OP1/1 3.03 LYS230:A.N/1
DC8:P.OP1/1 3.05 GLY107:A.N/1
DC8:P.OP1/1 2.91 ALA110:A.N/1
DC8:P.OP2/1 2.96 SER109:A.N/1
DG9:P.OP1/1 2.64 GLY105:A.N/1
DT2:D.OP1/1 2.87 GLY66:A.N/1
DT2:D.OP1/1 2.92 ILE69:A.N/1
DT2:D.OP2/1 3.24 LYS68:A.N/1
DC3:D.OP1/1 2.86 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA7:T.OP1/1 2.66 113:T/1 2.91 ARG283:A.O/1
DA7:T.OP1/1 2.66 113:T/1 3.03 ILE293:A.N/1
DA7:T.N3/1 3.12 541:A/1 2.73 ARG283:A.NH1/1
DA7:T.N3/1 3.12 541:A/1 3.15 ARG283:A.NH2/1
DA7:T.N3/1 3.12 541:A/1 2.64 GLU295:A.OE1/1
DC8:T.O2/1 2.88 622:A/1 2.88 GLU295:A.OE2/1
DG9:T.O4'/1 3.14 118:P/1 3.14 LYS234:A.NZ/1
DG9:T.N2/1 3.09 124:T/1 3.12 SER229:A.OG/1
DC10:T.OP2/1 2.51 105:T/1 3.06 GLU232:A.N/1
DC10:T.OP2/1 2.51 105:T/1 3.04 GLU232:A.N/1
DC10:T.OP2/1 2.65 111:T/1 3.01 THR233:A.OG1/1
DA11:T.OP1/1 2.8 121:T/1 3.1 LYS230:A.O/1
DA11:T.OP2/1 2.74 574:A/1 2.73 LYS230:A.O/1
DA11:T.O3'/1 3.08 125:T/1 3.14 HIS135:A.N/1
DT12:T.OP1/1 2.41 101:T/1 2.98 HIS134:A.N/1
DT12:T.OP1/1 2.85 125:T/1 3.14 HIS135:A.N/1
DG9:P.OP2/1 2.58 103:P/1 3.01 THR101:A.O/1
DG9:P.N3/1 2.77 545:A/1 2.65 LYS234:A.NZ/1
DG1:D.OP1/1 2.64 103:D/1 2.83 TYR39:A.OH/1
DG1:D.OP1/1 2.64 103:D/1 2.66 LYS72:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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