Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DG6:T.N7/1 2.64 LYS280:A.NZ/1
DG6:T.N2/1 3.17 ARG283:A.NH1/1
DG6:T.N3/1 3.25 ARG283:A.NH1/1
DA7:T.OP1/1 2.75 THR292:A.OG1/1
DC8:T.OP1/1 2.94 ASN294:A.ND2/1
DG9:T.OP1/1 2.58 TYR296:A.OH/1
DG9:T.N3/1 2.91 LYS234:A.NZ/1
DC10:T.OP1/1 2.97 THR233:A.N/1
DC10:T.OP1/1 2.9 LYS234:A.N/1
DA11:T.OP1/1 3.01 LYS230:A.N/1
DC8:P.OP1/1 3.13 GLY107:A.N/1
DC8:P.OP1/1 2.85 ALA110:A.N/1
DC8:P.OP2/1 2.9 SER109:A.N/1
DG9:P.OP1/1 2.72 GLY105:A.N/1
DT2:D.OP1/1 2.81 GLY66:A.N/1
DT2:D.OP1/1 2.92 ILE69:A.N/1
DT2:D.OP2/1 3.21 LYS68:A.N/1
DC3:D.OP1/1 2.87 GLY64:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA7:T.OP1/1 2.74 111:T/1 2.83 ARG283:A.O/1
DA7:T.OP1/1 2.74 111:T/1 3.06 ILE293:A.N/1
DA7:T.N3/1 2.98 559:A/1 2.81 ARG283:A.NH1/1
DA7:T.N3/1 2.98 559:A/1 2.75 GLU295:A.OE1/1
DC8:T.OP1/1 2.95 502:A/1 2.28 ARG299:A.NH2/1
DC8:T.O2/1 2.78 113:T/1 3.36 ARG258:A.NH1/1
DC8:T.O2/1 2.78 113:T/1 2.83 GLU295:A.OE2/1
DG9:T.N2/1 3.22 108:T/1 3.05 SER229:A.OG/1
DC10:T.OP2/1 2.59 104:T/1 3.11 GLU232:A.N/1
DA11:T.OP1/1 2.96 121:T/1 2.98 LYS230:A.O/1
DA11:T.O3'/1 3.04 118:T/1 3.15 HIS135:A.N/1
DT12:T.OP1/1 2.54 103:T/1 2.86 HIS134:A.N/1
DT12:T.OP1/1 2.86 118:T/1 3.15 HIS135:A.N/1
DG9:P.OP2/1 2.69 202:P/1 2.9 THR101:A.O/1
DG9:P.N2/1 3.03 209:P/1 3.2 LYS234:A.NZ/1
DG9:P.N3/1 2.83 530:A/1 2.61 LYS234:A.NZ/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text