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Nucleic atom dist Protein atom
DA6:T.N7/1 3.03 LYS280:A.NZ/1
DA6:T.N3/1 2.86 ARG283:A.NH1/1
DG8:T.OP1/1 2.96 ASN294:A.ND2/1
DC9:T.OP1/1 2.69 TYR296:A.OH/1
DG10:T.OP1/1 2.97 THR233:A.N/1
DG10:T.OP1/1 2.91 LYS234:A.N/1
DC11:T.OP1/1 3.1 LYS230:A.N/1
DG8:P.OP1/1 2.87 GLY107:A.N/1
DG8:P.OP1/1 2.96 ALA110:A.N/1
DG8:P.OP2/1 3.21 SER109:A.N/1
DC9:P.OP1/1 2.7 GLY105:A.N/1
DA10:P.OP1/1 2.88 ARG254:A.NH2/1
DG1:D.OP2/1 2.72 LYS68:A.NZ/1
DT2:D.OP1/1 2.91 GLY66:A.N/1
DT2:D.OP1/1 2.99 ILE69:A.N/1
DT2:D.OP2/1 3.37 LYS68:A.N/1
DC3:D.OP1/1 2.93 GLY64:A.N/1
DC3:D.OP1/1 3.22 VAL65:A.O/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG10:T.OP2/1 2.53 103:T/1 2.78 GLU232:A.N/1
DC11:T.OP1/1 2.97 521:A/1 2.74 LYS230:A.O/1
DG1:D.OP1/1 3.09 512:A/1 2.64 TYR39:A.OH/1
DG1:D.OP1/1 2.81 522:A/1 2.74 TYR39:A.OH/1
DG1:D.OP1/1 2.87 517:A/1 2.71 LYS72:A.NZ/1
DG1:D.OP1/1 2.81 522:A/1 2.95 LYS72:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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