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Nucleic atom dist Protein atom
DA6:T.OP2/1 2.93 LYS280:A.NZ/1
DA6:T.N3/1 3.16 ARG283:A.NH1/1
DG8:T.OP1/1 2.9 ASN294:A.ND2/1
DC9:T.OP1/1 2.56 TYR296:A.OH/1
DG10:T.OP1/1 3 THR233:A.N/1
DG10:T.OP1/1 2.85 LYS234:A.N/1
DC11:T.OP1/1 3.07 LYS230:A.N/1
DG8:P.OP1/1 3.22 GLY107:A.N/1
DG8:P.OP1/1 2.83 ALA110:A.N/1
DG8:P.OP2/1 3.02 SER109:A.N/1
DC9:P.OP1/1 2.66 GLY105:A.N/1
DA10:P.OP1/1 2.91 ARG254:A.NH2/1
DA10:P.N3/1 2.79 TYR271:A.OH/1
DT11:P.OP1/1 2.89 ASP190:A.OD1/1
DT11:P.OP1/1 3.04 ASP192:A.OD1/1
DT11:P.OP1/1 2.99 ASP192:A.OD2/1
DT11:P.O2/1 2.94 ASN279:A.ND2/1
DG1:D.OP1/1 2.7 LYS68:A.NZ/1
DG1:D.OP2/1 2.79 LYS35:A.NZ/1
DT2:D.OP1/1 2.76 GLY66:A.N/1
DT2:D.OP1/1 2.97 ILE69:A.N/1
DT2:D.OP2/1 3.14 LYS68:A.N/1
DC3:D.OP1/1 2.71 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA6:T.OP1/1 3.06 617:A/1 2.78 ASN37:A.ND2/1
DA6:T.OP2/1 2.75 536:A/1 2.59 LYS280:A.NZ/1
DA6:T.N7/1 2.77 111:T/1 3.05 ASN37:A.ND2/1
DA6:T.N6/1 3.18 670:A/1 2.91 ASN37:A.OD1/1
DG8:T.OP1/1 2.75 559:A/1 2.66 ARG299:A.NH2/1
DG8:T.N3/1 3.29 605:A/1 2.75 GLU295:A.OE2/1
DG10:T.OP2/1 2.72 109:T/1 2.88 GLU232:A.N/1
DG10:T.O4'/1 2.72 503:A/1 2.26 LYS234:A.NZ/1
DA12:T.OP1/1 2.63 106:T/1 2.87 HIS134:A.N/1
DA12:T.OP1/1 2.91 125:T/1 3.29 HIS135:A.N/1
DC9:P.OP2/1 2.76 593:A/1 2.73 LYS27:A.NZ/1
DC9:P.OP2/1 2.63 504:P/1 2.9 THR101:A.O/1
DC9:P.O2/1 2.64 505:P/1 2.68 LYS234:A.NZ/1
DA10:P.OP1/1 2.87 550:A/1 2.64 SER104:A.OG/1
DA10:P.OP1/1 2.87 550:A/1 2.95 ARG254:A.NE/1
DA10:P.O4'/1 3.01 505:P/1 2.68 LYS234:A.NZ/1
DT11:P.O4/1 2.8 510:P/1 2.91 ASP276:A.OD2/1
DG1:D.OP2/1 2.59 524:A/1 2.78 GLU26:A.OE2/1
DG1:D.OP2/1 2.59 524:A/1 2.57 TYR39:A.OH/1
DC3:D.OP2/1 2.88 204:D/1 3.39 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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