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Nucleic atom dist Protein atom
U37:I.OP1/1 2.97 ARG300:A.NH2/1
U37:I.OP2/1 3.49 ARG300:A.NE/1
G39:I.O3'/1 3.25 ASN252:A.ND2/1
G39:I.O2'/1 3.26 ASN252:A.ND2/1
A40:I.OP1/1 2.73 ASN252:A.N/1
A40:I.OP1/1 2.41 ASN253:A.N/1
A40:I.OP2/1 3.02 ASN252:A.N/1
A40:I.N7/1 3.11 ASN253:A.ND2/1
A40:I.N6/1 3.1 ASN216:A.OD1/1
A42:I.N6/1 2.82 ARG215:A.NH2/1
A42:I.N6/1 3.33 ASP288:A.OD2/1
C43:I.N3/1 2.81 GLU211:A.OE2/1
C43:I.N4/1 2.94 GLU211:A.OE1/1
A44:I.O2'/1 3.45 ASN241:A.ND2/1
U46:I.O2/1 2.35 ARG159:A.NH2/1
U46:I.N3/1 2.56 ASN123:A.OD1/1
U46:I.O4/1 3.26 ASN123:A.ND2/1
A47:I.O3'/1 3.21 ARG159:A.O/1
A47:I.O2'/1 3.28 ASN123:A.N/1
A47:I.O2'/1 2.54 ARG159:A.O/1
C48:I.OP1/1 3.18 ARG159:A.N/1
C48:I.OP2/1 2.74 ARG201:A.NH1/1
C48:I.O5'/1 3.2 ARG201:A.NH1/1
C48:I.N3/1 2.72 THR202:A.N/1
C48:I.N4/1 3.25 THR202:A.N/1
C48:I.N4/1 2.6 THR202:A.OG1/1
A49:I.OP1/1 2.91 ARG201:A.NH1/1
A49:I.O4'/1 2.8 TRP120:A.NE1/1
A49:I.N3/1 2.82 TYR162:A.OH/1
G50:I.N7/1 2.77 ARG148:A.NE/1
G50:I.O6/1 3.33 ARG148:A.NH2/1
A51:I.OP1/1 2.88 SER151:A.N/1
A51:I.OP2/1 2.72 ARG158:A.NH1/1
A51:I.N6/1 3.31 ASP321:A.OD2/1
G52:I.N7/1 3.26 ARG38:A.NH2/1
G52:I.O6/1 2.92 ARG38:A.NE/1
G52:I.N2/1 3.18 ASN31:A.O/1
G55:I.O6/1 2.7 LYS289:A.N/1
G55:I.N2/1 3.2 ASP288:A.OD1/1
U57:I.N3/1 2.78 PHE154:A.O/1
C58:I.OP1/1 2.96 ARG295:A.NE/1
C58:I.OP2/1 2.57 LYS299:A.NZ/1
C58:I.O2/1 3.3 ARG153:A.NE/1
C58:I.O2/1 2.89 ARG153:A.NH2/1
C58:I.N4/1 3.06 ARG153:A.O/1
C58:I.N4/1 3.2 ARG295:A.NH1/1
C92:I.O2/1 2.8 ASN216:A.ND2/1
U101:I.OP2/1 1.81 ARG305:A.NH1/1
G108:I.N2/1 2.74 ASN37:D.OD1/1
G108:I.N2/1 2.7 ASN37:D.ND2/1
U109:I.O4'/1 3 ARG57:H.NH2/1
U109:I.O2'/1 3.14 ARG63:B.NH2/1
U109:I.O2'/1 3.21 ASN33:H.OD1/1
U109:I.O2/1 2.94 ASN35:H.OD1/1
U109:I.N3/1 3.2 ASN35:H.OD1/1
U109:I.N3/1 2.93 ASN35:H.ND2/1
U110:I.O2/1 2.85 SER65:B.N/1
U110:I.N3/1 2.98 ASN37:B.OD1/1
U110:I.O4/1 3.25 ASN37:B.ND2/1
U111:I.O3'/1 2.95 ARG74:F.NH2/1
U111:I.O2'/1 2.99 HIS36:C.ND1/1
U111:I.N3/1 3.07 ASN38:C.OD1/1
U111:I.N3/1 3.14 ASN38:C.ND2/1
U111:I.O4/1 2.88 ASN38:C.ND2/1
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Core number Atoms Action


Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).


W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).


CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
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