Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DG3:T.O3'/1 3.33 LYS450:A.NZ/1
DC4:T.OP1/1 3.05 LYS450:A.NZ/1
DA5:T.OP1/1 2.9 ARG442:A.NH2/1
DA5:T.OP2/1 2.91 ARG442:A.NE/1
DA5:T.N3/1 3.09 ARG445:A.NH1/1
DT6:T.OP1/1 2.88 ARG449:A.NE/1
DT6:T.OP1/1 3.31 ARG449:A.NH2/1
DT6:T.O2/1 3.24 ARG445:A.NH1/1
DA7:T.OP1/1 2.81 ASN457:A.ND2/1
DA7:T.O3'/1 3.42 HIS459:A.NE2/1
DA7:T.N3/1 3.34 ARG387:A.NH1/1
DC8:T.OP1/1 3.26 HIS459:A.NE2/1
DG9:T.OP1/1 2.7 GLU386:A.N/1
DG9:T.OP1/1 3.05 ARG387:A.N/1
DG2:P.OP1/1 2.9 GLY247:A.N/1
DG2:P.OP1/1 3.11 THR250:A.N/1
DG2:P.OP1/1 2.69 THR250:A.OG1/1
DT3:P.OP1/1 2.84 GLY245:A.N/1
DT3:P.OP1/1 3.29 VAL246:A.N/1
DA4:P.OP1/1 2.76 ARG416:A.NH2/1
DA4:P.O3'/1 2.97 ASP332:A.OD1/1
DA4:P.O3'/1 2.77 ASP418:A.OD2/1
DG1:D.OP1/1 2.74 ARG175:A.NE/1
DG1:D.OP2/1 2.95 ARG175:A.NH2/1
DG1:D.N7/1 3.26 ARG175:A.NH1/1
DG1:D.N3/1 2.63 THR178:A.OG1/1
DC2:D.OP1/1 2.99 GLY206:A.N/1
DC2:D.OP1/1 2.83 SER209:A.N/1
DC2:D.OP1/1 2.71 SER209:A.OG/1
DC2:D.OP2/1 3.13 HIS208:A.N/1
DC3:D.OP1/1 2.75 HIS204:A.N/1
DC3:D.OP1/1 2.98 HIS204:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC4:T.O2/1 2.71 116:T/1 2.92 ARG181:A.NH1/1
DC4:T.O2/1 2.71 116:T/1 2.88 ARG181:A.NH2/1
DA5:T.OP2/1 2.67 110:T/1 2.91 ARG181:A.NH2/1
DA5:T.OP2/1 2.67 110:T/1 2.89 GLU443:A.OE2/1
DA5:T.OP2/1 2.67 110:T/1 3.14 ARG446:A.NE/1
DT6:T.OP1/1 2.81 124:T/1 2.87 ARG445:A.O/1
DT6:T.OP1/1 2.81 124:T/1 2.88 LEU456:A.N/1
DC8:T.O2/1 2.74 120:T/1 2.84 ARG387:A.NH1/1
DG9:T.OP2/1 2.97 846:A/1 2.64 ALA384:A.O/1
DG9:T.O3'/1 2.67 111:T/1 2.73 ARG387:A.O/1
DC1:P.O5'/1 2.82 108:P/1 3.25 LYS249:A.NZ/1
DG2:P.OP2/1 2.59 102:P/1 2.94 LYS249:A.N/1
DG2:P.N3/1 3.08 111:P/1 3.29 GLN275:A.NE2/1
DA4:P.OP1/1 3.07 991:A/1 3.12 HIS329:A.NE2/1
DA4:P.OP1/1 2.71 105:P/1 2.81 ASP330:A.OD2/1
DA4:P.OP1/1 3.07 991:A/1 2.92 ARG416:A.NE/1
DA4:P.OP1/1 2.71 105:P/1 2.91 ASP418:A.OD2/1
DA4:P.O3'/1 2.86 105:P/1 2.81 ASP330:A.OD2/1
DA4:P.O3'/1 0.01 917:A/1 2.96 ASP332:A.OD1/1
DA4:P.O3'/1 0.01 917:A/1 2.77 ASP418:A.OD2/1
DA4:P.O3'/1 2.86 105:P/1 2.91 ASP418:A.OD2/1
DC3:D.OP1/1 2.3 101:D/1 2.71 LEU202:A.O/1
DC3:D.OP1/1 2.3 101:D/1 2.99 PHE205:A.O/1
DC3:D.OP1/1 2.83 101:D/1 2.71 LEU202:A.O/1
DC3:D.OP1/1 2.83 101:D/1 2.99 PHE205:A.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text