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Nucleic atom dist Protein atom
DC4:T.OP1/1 2.78 LYS450:A.NZ/1
DA5:T.OP1/1 2.81 ARG442:A.NH2/1
DA5:T.OP2/1 2.97 ARG442:A.NE/1
DA5:T.N3/1 3.08 ARG445:A.NH1/1
DT6:T.OP1/1 3.14 ARG449:A.NE/1
DT6:T.OP1/1 3.06 ARG449:A.NH2/1
DA7:T.OP1/1 3.1 ASN457:A.ND2/1
DA7:T.N3/1 3.38 ARG387:A.NH1/1
DC8:T.OP1/1 3.35 HIS459:A.NE2/1
DG9:T.OP1/1 2.71 GLU386:A.N/1
DG9:T.OP1/1 3.12 ARG387:A.N/1
DG2:P.OP1/1 2.76 GLY247:A.N/1
DG2:P.OP1/1 3.07 THR250:A.N/1
DG2:P.OP1/1 2.54 THR250:A.OG1/1
DT3:P.OP1/1 2.94 GLY245:A.N/1
DA4:P.OP1/1 2.88 HIS329:A.NE2/1
DA4:P.OP1/1 2.98 ARG416:A.NH2/1
U5:P.OP1/1 3.01 THR241:A.O/1
DG1:D.OP1/1 2.56 ARG175:A.NE/1
DG1:D.OP1/1 2.58 ARG175:A.NH2/1
DG1:D.N3/1 2.58 THR178:A.OG1/1
DC2:D.OP1/1 3.01 GLY206:A.N/1
DC2:D.OP1/1 2.82 SER209:A.N/1
DC2:D.OP1/1 3 SER209:A.OG/1
DC2:D.OP1/1 2.75 SER209:A.OG/1
DC2:D.OP2/1 3.12 HIS208:A.N/1
DC3:D.OP1/1 2.82 HIS204:A.N/1
DC3:D.OP1/1 2.91 HIS204:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA5:T.OP2/1 2.66 110:T/1 3.06 ARG181:A.NH2/1
DA5:T.OP2/1 2.66 110:T/1 2.89 GLU443:A.OE2/1
DA5:T.OP2/1 2.66 110:T/1 3.22 ARG446:A.NE/1
DT6:T.OP1/1 2.97 661:A/1 2.75 ARG445:A.O/1
DT6:T.OP1/1 2.97 661:A/1 2.95 LEU456:A.N/1
DT6:T.OP1/1 2.89 118:T/1 2.94 LEU456:A.O/1
DC8:T.O2/1 2.82 109:P/1 2.89 ARG387:A.NH1/1
DG9:T.O3'/1 2.51 103:T/1 2.82 ARG387:A.O/1
DG2:P.OP2/1 2.54 102:P/1 2.95 LYS249:A.N/1
DG2:P.N3/1 3.15 111:P/1 3.17 GLN275:A.NE2/1
DT3:P.O4'/1 3.04 111:P/1 3.17 GLN275:A.NE2/1
DA4:P.OP2/1 2.78 108:P/1 3.13 HIS329:A.NE2/1
DA4:P.OP2/1 2.78 108:P/1 2.96 ARG416:A.NE/1
U5:P.OP2/1 2.91 110:P/1 3.02 VAL248:A.N/1
DC3:D.OP1/1 2.51 101:D/1 2.94 LEU202:A.O/1
DC3:D.OP1/1 3.02 101:D/1 2.94 LEU202:A.O/1
DG4:D.OP1/1 3.06 111:D/1 3.16 ARG446:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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