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Nucleic atom dist Protein atom
DC5:P.OP1/1 2.63 ARG454:B.NH2/1
DG6:P.OP1/1 3.02 THR473:B.N/1
DG6:P.OP2/1 2.53 THR473:B.OG1/1
DG7:P.OP2/1 2.55 ALA471:B.N/1
DA8:P.OP2/1 2.85 THR469:B.N/1
DC10:P.OP1/1 3.16 ARG63:B.NH1/1
DG11:P.OP1/1 3.02 GLY358:B.N/1
DG11:P.OP1/1 2.92 THR361:B.N/1
DG11:P.OP1/1 2.56 THR361:B.OG1/1
DG11:P.OP2/1 3.09 VAL360:B.N/1
DA12:P.OP1/1 2.85 GLY356:B.N/1
DC13:P.OP1/1 2.44 LYS321:B.NZ/1
DC13:P.O3'/1 3.06 SER196:B.OG/1
DA4:T.OP1/1 2.69 ARG507:B.NH2/1
DA4:T.N6/1 2.62 THR44:B.OG1/1
DT7:T.OP2/1 2.57 GLU419:B.N/1
DT7:T.OP2/1 2.86 GLU419:B.O/1
DC8:T.OP2/1 2.85 SER417:B.N/1
DC8:T.OP2/1 2.58 SER417:B.OG/1
DG9:T.OP1/1 2.84 LYS414:B.N/1
DG9:T.OP2/1 2.82 SER415:B.OG/1
DC12:T.OP1/1 2.12 SER388:B.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG7:P.OP2/1 3.11 745:B/1 2.94 THR469:B.OG1/1
DA8:P.N7/1 3.02 741:B/1 2.92 THR469:B.OG1/1
DT5:T.OP1/1 2.95 712:B/1 2.77 THR421:B.OG1/1
DT5:T.OP1/1 2.95 712:B/1 2.63 LYS461:B.NZ/1
DT5:T.OP1/1 2.95 712:B/1 2.85 ARG507:B.NH1/1
DT5:T.OP2/1 2.56 101:T/1 2.64 LYS461:B.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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