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Nucleic atom dist Protein atom
DA2:G.OP1/1 2.38 GLN24:A.NE2/1
DA2:G.OP1/1 2.16 ARG59:A.NH1/1
DA2:G.O5'/1 2.92 ARG59:A.NH2/1
DA3:G.OP1/1 2.84 VAL27:B.N/1
DA3:G.OP1/1 2.99 SER61:B.OG/1
DC4:G.OP2/1 2.7 ASP29:B.N/1
DA5:G.OP1/1 2.34 ARG14:F.NH1/1
DG13:G.OP2/1 2.86 ASN10:E.OD1/1
DG13:G.O5'/1 2.87 ASN10:E.OD1/1
DG13:G.O5'/1 2.62 ASN10:E.ND2/1
DA14:G.OP1/1 2.64 ASN10:E.N/1
DG15:G.OP1/1 2.38 ARG78:F.NH1/1
DG15:G.OP2/1 2.55 ARG16:E.NH2/1
DG15:G.O3'/1 3.46 ARG77:F.NH1/1
DT16:G.OP1/1 2.55 ARG77:F.NH2/1
DA22:G.O3'/1 3.27 ARG245:C.NE/1
DT23:G.OP1/1 3.29 ARG245:C.NE/1
DT24:G.OP1/1 2.81 ARG248:C.NH1/1
DT24:G.OP2/1 2.39 GLU80:C.N/1
DT24:G.O5'/1 2.79 TYR86:C.OH/1
DG25:G.OP1/1 2.58 ARG84:C.NH1/1
DG25:G.OP1/1 2.81 TYR86:C.OH/1
DG25:G.OP2/1 2.39 ARG66:D.NH2/1
DG25:G.O5'/1 2.86 ARG84:C.NH1/1
DG26:G.O3'/1 2.55 SER185:C.OG/1
DG26:G.O6/1 2.9 GLN178:C.NE2/1
DG27:G.O6/1 2.76 ASP166:C.O/1
DG27:G.N3/1 2.32 SER181:C.OG/1
DC28:G.OP1/1 2.74 ARG163:C.NH2/1
DC28:G.OP2/1 2.46 TYR188:C.OH/1
DA1:H.O5'/1 3.28 GLN24:C.N/1
DA1:H.O5'/1 2.31 ILE35:C.O/1
DA1:H.O3'/1 3.18 GLN24:C.NE2/1
DT2:H.OP1/1 2.41 GLN24:C.NE2/1
DT2:H.OP1/1 2.24 ARG59:C.NH1/1
DT3:H.OP1/1 3.35 VAL27:D.N/1
DT3:H.OP1/1 2.65 SER61:D.OG/1
DT4:H.OP1/1 3.32 GLY30:D.N/1
DT4:H.OP2/1 3.06 VAL27:D.O/1
DT4:H.OP2/1 2.93 ASP29:D.N/1
DA5:H.OP1/1 2.44 ARG14:E.NH1/1
DT13:H.OP1/1 2.87 GLU9:F.OE2/1
DT13:H.OP1/1 2.72 ASN10:F.ND2/1
DT13:H.OP2/1 2.84 ASN10:F.OD1/1
DT13:H.OP2/1 2.76 ASN10:F.ND2/1
DC15:H.OP1/1 2.44 ARG78:E.NH2/1
DC15:H.OP2/1 2.39 ARG16:F.NH1/1
DC15:H.OP2/1 2.91 ARG16:F.NH2/1
DT16:H.OP1/1 3.02 ARG41:B.NH2/1
DT16:H.OP1/1 2.87 ARG77:E.NH1/1
DT16:H.OP2/1 2.73 ARG41:B.NH2/1
DT22:H.O5'/1 3.46 ARG245:A.NH2/1
DT23:H.OP1/1 2.7 ARG245:A.NE/1
DT23:H.OP1/1 2.75 ARG248:A.NH2/1
DT23:H.OP2/1 2.89 ARG245:A.NH2/1
DC24:H.OP2/1 3.34 GLU80:A.N/1
DC24:H.O5'/1 3.23 ARG248:A.NH1/1
DT25:H.OP1/1 2.36 ARG84:A.NH1/1
DT25:H.OP1/1 3.02 ARG84:A.NH2/1
DC26:H.N4/1 2.6 ASP244:A.OD2/1
DG27:H.OP1/1 2.37 SER185:A.OG/1
DG27:H.O3'/1 3.19 ARG163:A.NH2/1
DG27:H.O6/1 2.69 ASP166:A.O/1
DG27:H.N3/1 2.55 SER181:A.OG/1
DT28:H.OP2/1 2.47 TYR188:A.OH/1
DT28:H.O3'/1 2.69 HIS208:A.NE2/1
DT28:H.O2/1 2.91 TYR188:A.OH/1
DT28:H.N3/1 2.47 TYR217:A.OH/1
DG29:H.O5'/1 2.62 HIS208:A.NE2/1
DT30:H.OP1/1 2.81 THR209:A.N/1
DT30:H.OP1/1 2.89 THR209:A.O/1
DT30:H.OP2/1 2.4 LYS211:A.NZ/1
DG31:H.OP2/1 2.9 THR209:A.OG1/1
DC39:H.OP1/1 2.71 LYS12:B.NZ/1
DG14:I.OP1/1 2.8 ARG95:B.NH1/1
DA23:I.N3/1 3.46 ARG146:A.NH2/1
DA30:I.N3/1 2.72 ARG46:L.NH1/1
DC31:I.OP1/1 2.79 GLY47:L.N/1
DC31:I.OP2/1 3.36 LYS84:L.N/1
DC31:I.O3'/1 2.92 GLU44:L.OE2/1
DC32:I.OP1/1 2.13 ARG42:L.NH2/1
DC32:I.OP2/1 3.21 SER50:L.OG/1
DT36:I.O2/1 3.14 ARG63:K.NH1/1
DA37:I.O4'/1 2.55 ARG63:K.NH1/1
DT39:I.O4'/1 3.18 ARG60:K.NH1/1
DA41:I.O5'/1 2.88 ARG55:K.NE/1
DA41:I.O5'/1 2.73 ARG55:K.NH2/1
DT42:I.OP2/1 3.01 ARG55:K.NH1/1
DT43:I.OP2/1 3.39 LYS88:K.NZ/1
DA44:I.OP2/1 2.43 LYS75:L.NZ/1
DT53:I.OP1/1 3 THR2:L.OG1/1
DT53:I.OP1/1 2.38 SER4:L.N/1
DT53:I.OP2/1 2.52 SER4:L.OG/1
DT54:I.OP1/1 2.45 LYS27:L.NZ/1
DA71:I.O4'/1 3.15 ARG131:B.NH2/1
DA71:I.N3/1 3.21 ARG131:B.NH1/1
DC72:I.O4'/1 3.18 ARG131:B.NH1/1
DC73:I.O2/1 2.22 ARG132:B.NH1/1
DA3:J.O3'/1 2.71 ARG117:B.NH1/1
DG4:J.OP1/1 2.38 ARG117:B.NH2/1
DA23:J.O3'/1 3.14 SER47:K.OG/1
DA24:J.OP1/1 2.38 GLY48:K.N/1
DT25:J.OP1/1 2.99 ASN51:K.OD1/1
DT25:J.OP2/1 2.38 ASN51:K.ND2/1
DA34:J.OP1/1 2.3 ARG56:L.NH2/1
DA35:J.N3/1 2.49 ARG60:K.NH2/1
DT36:J.O5'/1 2.6 ARG76:K.NH1/1
DT36:J.O2/1 3.16 ARG60:K.NH2/1
DA37:J.OP1/1 2.64 ARG76:K.NH1/1
DA37:J.OP1/1 3.1 ARG76:K.NH2/1
DT44:J.O2/1 3.14 ARG46:L.NH1/1
DT46:J.OP2/1 2.95 LYS5:K.N/1
DG47:J.OP1/1 2.63 LYS5:K.NZ/1
DA51:J.OP1/1 2.57 ARG164:A.NH2/1
DG52:J.OP1/1 2.82 TRP160:A.NE1/1
DG52:J.OP2/1 3.23 ARG163:A.N/1
DG52:J.N2/1 3.36 GLY139:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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