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Nucleic atom dist Protein atom
DT5:P.OP1/1 3.26 ARG696:A.NE/1
DT5:P.OP2/1 3.32 GLN663:A.NE2/1
DT5:P.OP2/1 2.78 ARG696:A.NH2/1
DG6:P.OP2/1 3.18 SER694:A.N/1
DG6:P.OP2/1 2.49 SER694:A.OG/1
DT7:P.OP2/1 2.85 SER692:A.N/1
DT10:P.OP1/1 2.94 GLY554:A.N/1
DT10:P.OP1/1 2.93 THR557:A.N/1
DT10:P.OP1/1 2.6 THR557:A.OG1/1
DT10:P.OP2/1 3.18 SER556:A.N/1
DA11:P.OP1/1 2.93 GLY552:A.N/1
DA11:P.OP1/1 2.84 GLY552:A.N/1
DDG12:P.OP1/1 3.04 ARG518:A.NH2/1
DA2:T.OP1/1 2.6 THR395:A.OG1/1
DT3:T.OP1/1 2.66 ASN397:A.N/1
DT3:T.OP2/1 2.78 THR395:A.N/1
DT3:T.OP2/1 2.79 LYS396:A.N/1
DC4:T.OP1/1 3.08 ASP399:A.N/1
DC4:T.OP1/1 2.79 LYS681:A.NZ/1
DC4:T.OP2/1 2.63 SER398:A.OG/1
DG5:T.OP1/1 2.93 ARG324:A.NH1/1
DG5:T.OP2/1 2.66 SER323:A.OG/1
DG5:T.OP2/1 3.2 LEU325:A.N/1
DG5:T.N7/1 2.97 MET685:A.N/1
DG5:T.O6/1 3 GLY686:A.N/1
DC6:T.OP1/1 2.63 TYR319:A.OH/1
DC6:T.OP1/1 2.74 ASN628:A.N/1
DC6:T.OP2/1 2.81 ASN628:A.ND2/1
DT7:T.OP1/1 2.75 HIS326:A.ND1/1
DT7:T.OP2/1 2.77 ASP626:A.N/1
DA8:T.OP1/1 2.78 ARG620:A.NH1/1
DA8:T.OP1/1 3.12 SER624:A.N/1
DA8:T.OP2/1 2.56 SER624:A.OG/1
DC9:T.OP1/1 3.02 GLN619:A.O/1
DC9:T.OP2/1 2.79 LYS621:A.N/1
DC12:T.OP1/1 3.28 LYS590:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT5:P.OP1/1 2.65 931:A/1 3.2 GLN663:A.NE2/1
DT5:P.OP1/1 2.65 931:A/1 2.62 SER694:A.OG/1
DT5:P.OP2/1 2.97 219:P/1 3.3 GLN663:A.NE2/1
DG6:P.OP1/1 3.1 969:A/1 2.68 ARG693:A.NH1/1
DG6:P.OP2/1 2.77 214:P/1 2.91 SER692:A.OG/1
DT7:P.OP2/1 3.06 959:A/1 2.67 SER690:A.OG/1
DG8:P.OP2/1 2.95 1072:A/1 2.95 SER690:A.N/1
DA11:P.OP2/1 2.68 209:P/1 3.02 ASP548:A.O/1
DDG12:P.OP1/1 2.72 202:P/1 2.6 GLU468:A.OE1/1
DDG12:P.OP1/1 2.88 1019:A/1 2.79 GLU468:A.OE2/1
DDG12:P.OP1/1 2.72 202:P/1 2.73 ARG518:A.NE/1
DDG12:P.OP1/1 2.88 1019:A/1 3.16 ARG518:A.NH2/1
DDG12:P.O5'/1 2.98 1074:A/1 2.95 LYS332:A.NZ/1
DDG12:P.O4'/1 3.13 1074:A/1 2.95 LYS332:A.NZ/1
DA2:T.OP2/1 3.18 1004:A/1 2.75 HIS393:A.O/1
DT3:T.OP1/1 2.68 205:T/1 3.07 PRO680:A.O/1
DT3:T.OP1/1 2.68 205:T/1 2.95 TYR682:A.N/1
DT3:T.N3/1 2.78 1004:A/1 2.75 HIS393:A.O/1
DC4:T.OP2/1 2.72 979:A/1 2.97 HIS393:A.N/1
DC4:T.OP2/1 2.72 979:A/1 2.71 ASP399:A.O/1
DC4:T.OP2/1 2.72 979:A/1 2.7 TYR436:A.OH/1
DG5:T.OP1/1 2.57 202:T/1 2.91 ARG324:A.N/1
DG5:T.OP1/1 2.57 202:T/1 2.87 HIS393:A.NE2/1
DG5:T.O5'/1 2.91 209:T/1 3.05 ASP399:A.OD2/1
DG5:T.O6/1 2.82 212:T/1 2.99 LYS681:A.N/1
DG5:T.N3/1 3.18 1008:A/1 2.76 ASP399:A.OD2/1
DA8:T.OP1/1 2.94 930:A/1 2.92 ARG620:A.NH2/1
DA8:T.OP2/1 2.42 201:T/1 2.61 SER622:A.OG/1
DC9:T.OP1/1 2.73 208:T/1 3.05 LYS336:A.NZ/1
DC9:T.OP1/1 2.9 1013:A/1 2.88 LYS336:A.NZ/1
DC9:T.OP1/1 2.9 1013:A/1 2.77 VAL617:A.O/1
DC9:T.OP1/1 2.73 208:T/1 2.85 LEU618:A.O/1
DC9:T.OP2/1 2.68 907:A/1 2.52 SER622:A.OG/1
DA11:T.O3'/1 3.03 204:T/1 2.97 LEU591:A.N/1
DC12:T.OP1/1 2.63 204:T/1 2.97 LEU591:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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