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Nucleic atom dist Protein atom
DT1:C.OP1/1 3.08 ARG177:A.NH2/1
DC2:C.OP1/1 2.72 TRP280:A.NE1/1
DC2:C.OP2/1 2.92 ASN222:A.ND2/1
DC2:C.OP2/1 2.73 ASN226:A.ND2/1
DC10:D.OP1/1 2.79 TYR128:A.OH/1
DG12:E.OP1/1 2.69 MET271:A.N/1
DG14:E.OP1/1 2.44 LYS78:A.NZ/1
DC15:E.OP1/1 3.14 ALA74:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC10:D.O3'/1 2.69 104:D/1 2.77 TYR171:A.OH/1
DC10:D.O3'/1 2.69 104:D/1 3.34 ASN174:A.ND2/1
DG12:E.N2/1 2.92 110:E/1 3.09 TYR269:A.N/1
DG12:E.N2/1 2.92 110:E/1 3.05 ASP308:A.OD2/1
DC15:E.OP1/1 2.41 103:E/1 2.99 ARG73:A.N/1
DC15:E.OP1/1 2.41 103:E/1 3.33 ARG73:A.NE/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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