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Nucleic atom dist Protein atom
DA-54:I.OP2/1 3.15 SER53:D.N/1
DA-43:I.OP1/1 2.7 ARG32:C.NH1/1
DG-42:I.OP1/1 3.08 ARG17:C.N/1
DG-42:I.OP2/1 3.12 ARG17:C.NE/1
DT-41:I.OP1/1 2.94 LYS15:C.N/1
DG-33:I.OP1/1 3.15 SER84:D.N/1
DG-33:I.OP1/1 2.85 THR85:D.N/1
DG-33:I.OP1/1 2.79 THR85:D.OG1/1
DG-33:I.OP2/1 3.35 SER84:D.N/1
DC-23:I.OP2/1 3.17 SER86:A.N/1
DA-22:I.OP1/1 2.94 ARG72:A.NH1/1
DA-22:I.OP1/1 2.98 ARG72:A.NH2/1
DA-22:I.OP1/1 3.22 PHE84:A.N/1
DA-22:I.OP2/1 3.03 ARG72:A.NH2/1
DC-13:I.OP1/1 3.15 ARG36:B.NH2/1
DC-13:I.OP2/1 3.25 ARG36:B.NH1/1
DG-5:I.OP1/1 2.42 ARG42:A.NE/1
DG-5:I.OP1/1 2.78 ARG42:A.NH2/1
DT-3:I.OP1/1 2.76 VAL117:A.N/1
DT-3:I.OP1/1 2.42 THR118:A.OG1/1
DG7:I.OP2/1 3.18 GLY48:F.N/1
DA8:I.OP1/1 2.64 ILE46:F.N/1
DA8:I.OP2/1 3.42 ARG35:F.NH1/1
DA8:I.OP2/1 3.36 ARG35:F.NH2/1
DA8:I.O3'/1 3.26 GLY44:E.N/1
DA9:I.OP1/1 2.76 GLY44:E.N/1
DA9:I.OP1/1 2.88 VAL46:E.N/1
DA9:I.OP1/1 3.08 ALA47:E.N/1
DA9:I.N3/1 3.2 ARG40:E.NH1/1
DC10:I.OP1/1 2.8 TYR41:E.N/1
DC10:I.O4'/1 3.22 ARG40:E.NH2/1
DT17:I.OP1/1 3.24 ARG69:E.NH1/1
DT17:I.OP1/1 3.03 ARG69:E.NH2/1
DT17:I.OP2/1 2.63 ARG69:E.NH2/1
DT18:I.OP1/1 2.92 ARG63:E.NH1/1
DT18:I.OP1/1 2.84 LYS64:E.N/1
DT18:I.OP2/1 3.03 LEU65:E.N/1
DG26:I.OP2/1 3.24 LYS79:F.NZ/1
DC27:I.OP1/1 3.18 LYS79:F.N/1
DC27:I.OP1/1 2.42 THR80:F.OG1/1
DA37:I.OP1/1 3.15 ALA45:G.N/1
DT38:I.OP1/1 2.81 ARG35:G.NH1/1
DT38:I.OP1/1 3.22 VAL43:G.N/1
DT38:I.OP2/1 2.45 ARG35:G.NH2/1
DG47:I.OP1/1 2.94 TYR37:H.OH/1
DG48:I.OP1/1 2.7 ARG29:G.NH2/1
DG48:I.OP1/1 3.38 SER33:H.N/1
DG48:I.O4'/1 2.85 ARG30:H.NH1/1
DT49:I.OP1/1 3.1 LYS31:H.N/1
DC58:I.OP1/1 3.15 ARG77:G.N/1
DC58:I.OP2/1 3.42 THR76:G.N/1
DA59:I.OP2/1 2.63 LYS75:G.NZ/1
DG70:I.OP1/1 2.91 ARG42:A.N/1
DG70:I.OP1/1 3.03 THR45:A.OG1/1
DA-54:J.OP1/1 3.36 SER53:H.N/1
DT-53:J.OP1/1 3.21 TYR39:H.OH/1
DA-43:J.OP1/1 3.05 ARG32:G.NH1/1
DG-42:J.OP1/1 3.15 ARG17:G.N/1
DG-42:J.OP2/1 3.27 ARG17:G.NE/1
DT-41:J.OP1/1 3.32 LYS15:G.N/1
DT-41:J.OP1/1 2.72 ARG20:G.NH2/1
DG-33:J.OP1/1 3.11 SER84:H.N/1
DG-33:J.OP1/1 2.56 THR85:H.OG1/1
DC-23:J.OP2/1 3.15 SER86:E.N/1
DA-22:J.OP1/1 2.7 ARG72:E.NH1/1
DA-22:J.OP1/1 3.01 PHE84:E.N/1
DA-22:J.OP2/1 3.16 ARG72:E.NH2/1
DC-13:J.OP1/1 3.02 ARG36:F.NH2/1
DC-13:J.OP2/1 2.93 ARG36:F.NH1/1
DT-3:J.OP1/1 2.83 VAL117:E.N/1
DT-3:J.OP1/1 2.71 THR118:E.OG1/1
DG7:J.OP2/1 2.56 GLY48:B.N/1
DA8:J.OP1/1 2.75 ILE46:B.N/1
DA8:J.OP2/1 2.38 ARG35:B.NH2/1
DA8:J.O3'/1 3.1 GLY44:A.N/1
DA9:J.OP1/1 2.98 GLY44:A.N/1
DA9:J.OP1/1 2.76 VAL46:A.N/1
DA9:J.OP1/1 2.94 ALA47:A.N/1
DA9:J.N3/1 2.67 ARG40:A.NH2/1
DC10:J.OP1/1 2.75 TYR41:A.N/1
DT17:J.OP1/1 3.26 ARG69:A.NH2/1
DT17:J.OP2/1 3.16 ARG69:A.NH1/1
DT17:J.O3'/1 2.84 ARG63:A.NH2/1
DT18:J.OP1/1 3.25 LYS64:A.N/1
DT18:J.OP2/1 2.91 LEU65:A.N/1
DC27:J.OP1/1 2.75 LYS79:B.N/1
DC27:J.OP1/1 3.08 THR80:B.N/1
DC27:J.OP1/1 2.99 THR80:B.OG1/1
DA37:J.OP1/1 3.05 ALA45:C.N/1
DT38:J.OP1/1 3.06 ARG35:C.NH1/1
DT38:J.OP1/1 3.37 VAL43:C.N/1
DT38:J.OP2/1 2.94 ARG35:C.NH2/1
DG47:J.O5'/1 3.01 TYR37:D.OH/1
DG47:J.O3'/1 2.94 ARG29:C.NH1/1
DG48:J.OP1/1 2.58 ARG29:C.NH2/1
DG48:J.OP1/1 3.2 SER33:D.N/1
DG48:J.O5'/1 3.36 ARG30:D.NH2/1
DT49:J.OP1/1 3.13 LYS31:D.N/1
DC58:J.OP1/1 3.14 THR76:C.N/1
DC58:J.OP1/1 3.05 ARG77:C.N/1
DG70:J.OP1/1 2.78 ARG42:E.N/1
DG70:J.OP1/1 2.88 THR45:E.OG1/1
DA71:J.OP2/1 2.36 ARG42:E.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA-12:J.OP1/1 2.85 203:F/1 2.81 LYS31:F.N/1
DA-12:J.OP2/1 2.97 203:F/1 2.81 LYS31:F.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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