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Nucleic atom dist Protein atom
DT2:O.OP2/1 3.01 LYS13:J.NZ/1
DG4:O.OP1/1 2.75 TYR16:J.N/1
DG4:O.OP1/1 2.85 THR50:J.OG1/1
DT5:O.OP1/1 2.83 ASN18:J.N/1
DA6:O.OP2/1 2.49 LYS30:M.NZ/1
DC8:O.OP2/1 3.04 ARG26:M.NH2/1
DC14:O.OP2/1 3.01 THR16:N.N/1
DC15:O.OP1/1 2.88 PHE12:N.O/1
DC15:O.OP1/1 2.66 ASP13:N.OD1/1
DC15:O.OP1/1 1.91 SER43:N.OG/1
DC15:O.OP2/1 2.74 MET14:N.N/1
DT16:O.OP1/1 2.15 PHE42:N.O/1
DT16:O.OP1/1 2.75 TYR45:N.OH/1
DT16:O.OP2/1 2.53 TYR25:N.OH/1
DC17:O.OP2/1 2.87 ARG29:N.NH2/1
DT25:O.O4'/1 3 TYR178:K.OH/1
DT26:O.OP2/1 3.27 ARG71:K.NH1/1
DC27:O.O2/1 3.16 HIS11:K.N/1
DC27:O.N3/1 2.31 ASP46:K.OD2/1
DC27:O.N4/1 2.94 ASP46:K.OD2/1
DT2:P.OP1/1 3.37 LYS13:L.NZ/1
DG4:P.OP1/1 2.72 TYR16:L.N/1
DG4:P.OP1/1 2.73 THR50:L.OG1/1
DT5:P.OP1/1 2.79 ASN18:L.N/1
DC8:P.OP2/1 2.46 ARG26:N.NH1/1
DC14:P.OP2/1 2.88 THR16:M.N/1
DC14:P.OP2/1 2.83 THR16:M.OG1/1
DC15:P.OP1/1 2.88 PHE12:M.O/1
DC15:P.OP1/1 2.59 ASP13:M.OD1/1
DC15:P.OP1/1 2.81 SER43:M.OG/1
DC15:P.OP2/1 2.75 MET14:M.N/1
DT16:P.OP1/1 3.05 SER43:M.N/1
DT16:P.OP1/1 2.76 TYR45:M.OH/1
DT16:P.OP2/1 2.58 TYR25:M.OH/1
DC17:P.OP2/1 2.91 ARG29:M.NH2/1
DT26:P.OP2/1 3.03 ARG71:I.NH2/1
DC27:P.O2/1 3.38 HIS11:I.N/1
DC27:P.N3/1 2.57 ASP46:I.OD2/1
DC27:P.N4/1 3.1 ASP46:I.OD2/1
DC28:P.O2/1 2.88 ASP46:I.OD1/1
DC28:P.N3/1 3.33 ASP46:I.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC8:O.OP2/1 2.87 101:O/1 3.15 ARG26:M.NE/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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