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Hbonds: Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where: Nucleic atom is atom of nucleic acid in Jmol/RasMol format. Protein atom is atom of protein in Jmol/RasMol format. Dist is distance from nucleic atom to protein atom in angstroms (Å). W-Bridges: W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where: Nucleic atom is atom of nucleic acid in Jmol/RasMol format. Protein atom is atom of protein in Jmol/RasMol format. Water is water molecule. d_n2w is distance from nucleic atom to water molecule (Å). d_p2w is distance from protein atom to water molecule (Å). CluD: CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where: Core number is serial number of cluster. Atoms is number of detected atoms in the cluster. |
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