Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC838:B.OP1/1 2.79 ARG35:A.NE/1
DC838:B.OP2/1 3.27 ARG35:A.NH2/1
DT839:B.OP2/1 2.96 ARG330:A.NH1/1
DT839:B.OP2/1 3.3 ARG330:A.NH2/1
DA840:B.OP1/1 2.97 ARG330:A.NH2/1
DG841:B.OP1/1 2.87 THR248:A.N/1
DG841:B.OP2/1 2.71 THR248:A.OG1/1
DG842:B.OP1/1 3.24 ARG273:A.NH2/1
DG842:B.OP2/1 2.7 GLU246:A.N/1
DG842:B.O5'/1 3.1 ARG273:A.NH1/1
DG843:B.OP1/1 2.76 ARG240:A.NH1/1
DG843:B.OP2/1 2.81 GLY244:A.N/1
DT844:B.OP1/1 2.81 LYS241:A.N/1
DT844:B.OP2/1 2.55 SER242:A.OG/1
DT844:B.O3'/1 2.97 ARG238:A.NH2/1
DC845:B.OP1/1 3.34 ARG238:A.NH2/1
DC845:B.OP2/1 2.59 LYS241:A.NZ/1
DT847:B.OP1/1 3.2 LYS217:A.N/1
DT866:C.OP2/1 2.17 ARG285:A.NH2/1
DT866:C.OP2/1 2.82 VAL303:A.N/1
DA867:C.OP1/1 2.71 ARG323:A.NH2/1
DA867:C.OP2/1 2.85 GLU301:A.N/1
DA867:C.OP2/1 3.22 GLU301:A.O/1
DG868:C.OP2/1 2.74 THR298:A.OG1/1
DC871:C.OP1/1 3.06 GLY185:A.N/1
DC871:C.OP1/1 2.86 SER188:A.N/1
DC871:C.OP1/1 2.74 SER188:A.OG/1
DC871:C.OP2/1 2.85 VAL187:A.N/1
DC872:C.OP1/1 2.68 GLY183:A.N/1
DC873:C.OP1/1 2.91 GLU104:A.OE1/1
DC873:C.O3'/1 2.87 SER101:A.OG/1
DC873:C.O3'/1 3.08 ASP103:A.OD1/1
DC873:C.O3'/1 3.29 GLU104:A.OE2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DT839:B.OP2/1 2.66 908:B/1 3.46 ARG38:A.NH1/1
DT839:B.O4/1 2.73 911:B/1 2.78 ASP293:A.O/1
DA840:B.OP1/1 2.77 1078:A/1 2.74 THR248:A.OG1/1
DA840:B.OP1/1 2.77 1078:A/1 3.03 ARG330:A.NE/1
DA840:B.O4'/1 2.87 1089:A/1 3.31 GLY33:A.N/1
DA840:B.O4'/1 2.87 1089:A/1 2.78 VAL40:A.N/1
DA840:B.O4'/1 2.87 1089:A/1 3.21 VAL40:A.O/1
DG841:B.OP1/1 2.69 1059:A/1 2.82 ARG37:A.NH2/1
DG841:B.OP1/1 2.69 1059:A/1 2.68 THR248:A.O/1
DG841:B.OP2/1 2.66 1047:A/1 2.63 GLU246:A.OE2/1
DG842:B.N7/1 2.92 1072:A/1 2.72 GLU246:A.OE2/1
DG842:B.N7/1 2.92 1072:A/1 3.28 LYS289:A.NZ/1
DT844:B.OP1/1 2.75 914:B/1 2.86 LEU239:A.O/1
DC845:B.OP1/1 3.03 1161:A/1 2.97 ARG238:A.NE/1
DC845:B.OP1/1 3.03 1161:A/1 3.17 ARG238:A.NH2/1
DC846:B.O3'/1 3.03 924:B/1 2.93 PHE218:A.N/1
DT847:B.OP1/1 2.86 924:B/1 2.93 PHE218:A.N/1
DA867:C.OP2/1 2.67 913:C/1 3.15 THR299:A.O/1
DA867:C.OP2/1 2.67 913:C/1 2.67 THR299:A.OG1/1
DG868:C.OP1/1 2.74 918:C/1 3.18 GLN297:A.O/1
DG868:C.OP2/1 2.7 916:C/1 3.28 THR299:A.N/1
DG868:C.OP2/1 2.7 916:C/1 2.74 THR299:A.OG1/1
DC872:C.OP1/1 2.74 921:C/1 2.96 ILE181:A.O/1
DC872:C.OP1/1 2.74 921:C/1 3.13 VAL184:A.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text