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Nucleic atom dist Protein atom
DA840:G.OP1/1 2.74 ARG330:F.NH1/1
DG841:G.OP1/1 2.83 THR248:F.N/1
DG841:G.OP2/1 2.64 THR248:F.OG1/1
DG842:G.OP1/1 2.82 ARG273:F.NH1/1
DG842:G.OP2/1 2.91 GLU246:F.N/1
DG843:G.OP2/1 2.73 GLY244:F.N/1
DT844:G.OP1/1 2.85 LYS241:F.N/1
DT844:G.OP2/1 2.66 SER242:F.OG/1
DT844:G.O3'/1 3.35 ARG238:F.NH2/1
DC845:G.OP1/1 2.9 ARG238:F.NH1/1
DC845:G.OP2/1 2.93 LYS241:F.NZ/1
DT866:H.OP2/1 2.21 ARG285:F.NH1/1
DT866:H.OP2/1 2.96 VAL303:F.N/1
DA867:H.OP1/1 2.86 ARG323:F.NH2/1
DA867:H.OP2/1 2.79 GLU301:F.N/1
DA867:H.OP2/1 3.07 GLU301:F.O/1
DG868:H.OP2/1 2.77 THR298:F.OG1/1
DG868:H.OP2/1 2.99 THR299:F.N/1
DC871:H.OP1/1 2.89 GLY185:F.N/1
DC871:H.OP1/1 2.95 SER188:F.N/1
DC871:H.OP1/1 2.77 SER188:F.OG/1
DC871:H.OP2/1 2.91 VAL187:F.N/1
DC872:H.OP1/1 2.72 GLY183:F.N/1
DC873:H.OP1/1 2.9 LYS150:F.NZ/1
DC873:H.OP1/1 2.74 LYS150:F.NZ/1
DT874:H.OP1/1 3.16 ASP103:F.OD2/1
DT874:H.O3'/1 3.07 PHE13:F.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA840:G.OP1/1 2.6 908:G/1 2.84 THR248:F.OG1/1
DA840:G.OP1/1 2.6 908:G/1 2.77 LYS291:F.NZ/1
DA840:G.OP1/1 2.6 908:G/1 2.91 ARG330:F.NE/1
DG841:G.OP1/1 2.71 914:G/1 3.04 THR248:F.O/1
DG841:G.OP2/1 2.74 1035:F/1 2.56 GLU246:F.OE2/1
DG842:G.OP1/1 2.53 904:G/1 3.14 ARG247:F.NH1/1
DG842:G.OP2/1 2.88 926:G/1 3.1 GLU246:F.OE1/1
DG842:G.N7/1 3.17 1032:F/1 2.53 GLU246:F.OE2/1
DT844:G.OP1/1 3.14 1047:F/1 2.67 LEU239:F.O/1
DT847:G.OP1/1 2.77 921:G/1 2.91 PHE218:F.N/1
DA867:H.OP2/1 3.15 1014:F/1 2.34 THR299:F.OG1/1
DG868:H.OP1/1 2.62 1005:H/1 2.98 GLN297:F.O/1
DG868:H.OP2/1 2.65 1007:H/1 3.23 THR299:F.N/1
DG868:H.OP2/1 2.65 1007:H/1 2.76 THR299:F.OG1/1
DG868:H.O5'/1 3.2 1007:H/1 2.76 THR299:F.OG1/1
DG869:H.OP2/1 2.65 1006:H/1 2.92 GLN297:F.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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