Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC838:B.OP1/1 3.28 ARG35:A.NH2/1
DT839:B.OP2/1 3.12 ARG330:A.NH2/1
DA840:B.OP1/1 3.27 ARG330:A.NH2/1
DG841:B.OP1/1 2.75 THR248:A.N/1
DG841:B.OP2/1 2.71 THR248:A.OG1/1
DG842:B.OP1/1 3.11 ARG247:A.NH2/1
DG842:B.OP1/1 3.18 ARG273:A.NH2/1
DG842:B.OP2/1 2.8 GLU246:A.N/1
DG842:B.O5'/1 3.01 ARG273:A.NH1/1
DG843:B.OP1/1 2.95 ARG240:A.NH1/1
DG843:B.OP2/1 2.9 GLY244:A.N/1
DT844:B.OP1/1 2.76 LYS241:A.N/1
DT844:B.OP2/1 2.78 SER242:A.OG/1
DT844:B.O3'/1 3 ARG238:A.NH2/1
DC845:B.OP1/1 3.38 ARG238:A.NH2/1
DC845:B.OP2/1 2.69 LYS241:A.NZ/1
DC846:B.OP1/1 2.95 LYS217:A.NZ/1
DT866:C.OP2/1 2.71 ARG285:A.NH1/1
DT866:C.OP2/1 2.91 ARG285:A.NH2/1
DT866:C.OP2/1 2.86 VAL303:A.N/1
DT866:C.O5'/1 3.23 ARG285:A.NH2/1
DA867:C.OP1/1 2.85 ARG323:A.NH2/1
DA867:C.OP2/1 2.66 GLU301:A.N/1
DA867:C.OP2/1 3.16 GLU301:A.O/1
DG868:C.OP2/1 2.63 THR298:A.OG1/1
DC871:C.OP1/1 3.09 GLY185:A.N/1
DC871:C.OP1/1 2.92 SER188:A.N/1
DC871:C.OP1/1 2.62 SER188:A.OG/1
DC871:C.OP2/1 2.82 VAL187:A.N/1
DC872:C.OP1/1 2.81 GLY183:A.N/1
DC873:C.OP1/1 2.81 LYS150:A.NZ/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA840:B.OP1/1 2.65 907:B/1 2.81 THR248:A.OG1/1
DA840:B.OP1/1 2.65 907:B/1 3.13 LYS291:A.NZ/1
DA840:B.OP1/1 2.65 907:B/1 2.99 ARG330:A.NE/1
DA840:B.O4'/1 2.99 1087:A/1 2.94 VAL40:A.N/1
DG841:B.OP1/1 2.76 912:B/1 2.97 ARG37:A.NH1/1
DG841:B.OP1/1 2.76 912:B/1 3.02 ARG37:A.NH2/1
DG841:B.OP1/1 2.76 912:B/1 2.79 THR248:A.O/1
DG841:B.OP2/1 2.68 1039:A/1 2.65 GLU246:A.OE2/1
DG842:B.N7/1 3.25 1016:A/1 2.49 GLU246:A.OE2/1
DG842:B.N7/1 3.25 1016:A/1 2.9 LYS289:A.NZ/1
DG843:B.OP1/1 2.8 1011:A/1 2.88 GLY244:A.O/1
DG843:B.OP1/1 2.8 1011:A/1 2.41 ARG273:A.NH1/1
DT847:B.OP1/1 2.93 1047:A/1 2.68 PHE215:A.O/1
DT847:B.OP1/1 2.93 1047:A/1 3.17 PHE218:A.N/1
DA867:C.OP2/1 2.42 1007:C/1 2.95 THR299:A.O/1
DA867:C.OP2/1 2.42 1007:C/1 2.91 THR299:A.OG1/1
DA867:C.O5'/1 3.12 1007:C/1 2.91 THR299:A.OG1/1
DG868:C.OP1/1 2.71 1014:C/1 3.13 GLN297:A.O/1
DG868:C.OP2/1 2.86 1018:A/1 3.21 THR299:A.N/1
DG868:C.OP2/1 2.86 1018:A/1 2.51 THR299:A.OG1/1
DC872:C.OP1/1 2.47 1009:C/1 2.98 ILE181:A.O/1
DC872:C.OP1/1 2.47 1009:C/1 2.83 VAL184:A.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text