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Nucleic atom dist Protein atom
A3:A.OP1/1 2.33 ARG661:B.NH1/1
A3:A.O3'/1 3.06 ARG661:B.NH2/1
A4:A.OP1/1 2.7 ARG661:B.NH2/1
C7:A.O2'/1 2.65 GLN894:B.OE1/1
A8:A.O4'/1 2.91 GLN894:B.OE1/1
G13:A.OP1/1 2.37 ALA59:B.N/1
A15:A.OP1/1 3.23 ARG66:B.NE/1
A15:A.OP1/1 2.52 ARG70:B.NH1/1
A15:A.OP2/1 3.02 ARG66:B.NH2/1
A15:A.O2'/1 2.54 TYR450:B.O/1
A16:A.OP1/1 2.55 ARG74:B.NH2/1
A16:A.OP2/1 2.34 ARG70:B.NH2/1
A16:A.O3'/1 2.85 ILE448:B.O/1
A16:A.O2'/1 3.09 ARG447:B.NE/1
A16:A.O2'/1 2.7 ILE448:B.O/1
A17:A.OP1/1 3.12 ILE448:B.N/1
A17:A.OP2/1 2.38 ARG74:B.NH1/1
A18:A.OP1/1 2.49 ARG165:B.NE/1
A18:A.OP1/1 3.05 ARG165:B.NH1/1
A18:A.N6/1 3.18 ARG71:B.NH2/1
A19:A.OP1/1 3.2 GLY166:B.N/1
A19:A.O2'/1 2.99 THR404:B.O/1
A19:A.O2'/1 2.78 PHE405:B.O/1
A20:A.OP1/1 2.74 THR404:B.O/1
A20:A.OP2/1 2.85 ARG403:B.NE/1
A20:A.OP2/1 2.86 ARG403:B.NH1/1
U23:A.O2'/1 2.53 TYR1131:B.O/1
U24:A.OP1/1 3.09 LYS1113:B.N/1
U24:A.O5'/1 3.08 TYR1131:B.O/1
U24:A.O2'/1 2.72 PHE105:B.O/1
U25:A.O2'/1 2.7 LYS111:B.NZ/1
G27:A.OP1/1 3.17 ARG115:B.NH1/1
G27:A.OP1/1 2.59 HIS116:B.NE2/1
A41:A.OP1/1 2.44 ARG340:B.NH2/1
A41:A.OP2/1 2.28 ARG340:B.NH1/1
G43:A.O2'/1 3.19 TYR359:B.OH/1
G43:A.N7/1 2.77 LYS336:B.NZ/1
G43:A.N2/1 3.25 PHE351:B.O/1
U44:A.O2'/1 2.32 GLN402:B.OE1/1
U44:A.O2/1 2.46 GLN402:B.NE2/1
U44:A.N3/1 3.47 TYR325:B.O/1
U45:A.OP1/1 2.72 GLN402:B.N/1
U45:A.OP1/1 2.62 ARG403:B.N/1
U45:A.O2'/1 3.06 ILE135:B.N/1
A46:A.OP1/1 2.91 HIS160:B.NE2/1
A46:A.OP1/1 2.43 ARG403:B.NH2/1
A47:A.O2'/1 2.57 LEU101:B.O/1
A47:A.O2'/1 2.84 SER104:B.OG/1
A47:A.N3/1 3.27 SER104:B.OG/1
A48:A.OP2/1 2.8 LYS163:B.NZ/1
A49:A.OP1/1 2.7 LYS76:B.NZ/1
A49:A.N3/1 2.95 ARG1122:B.NH1/1
A49:A.N3/1 3.24 ARG1122:B.NH2/1
U50:A.O4/1 3.28 ARG75:B.NH2/1
A51:A.N7/1 3.05 PHE1105:B.N/1
A52:A.O2'/1 3.14 LYS1124:B.NZ/1
G53:A.OP1/1 3.08 LYS1124:B.N/1
G53:A.OP2/1 3.39 LYS1123:B.NZ/1
U56:A.O2/1 2.84 ASN459:B.OD1/1
G58:A.O3'/1 3.03 ARG467:B.NH1/1
G58:A.O2'/1 2.7 LEU455:B.O/1
U59:A.OP1/1 2.77 ARG467:B.NH1/1
U59:A.OP1/1 2.54 ILE473:B.N/1
U59:A.OP2/1 2.77 THR472:B.OG1/1
U59:A.O2/1 2.65 ASN77:B.ND2/1
C60:A.OP1/1 3.29 ARG74:B.NH2/1
C60:A.OP1/1 3.23 LEU455:B.N/1
C61:A.OP1/1 3.18 ARG70:B.NH1/1
C61:A.OP1/1 2.49 SER460:B.OG/1
C61:A.OP2/1 2.82 ARG70:B.NE/1
G62:A.OP2/1 3.07 ARG69:B.NH1/1
U63:A.OP2/1 3.08 ARG69:B.NH1/1
U63:A.O2'/1 2.78 THR62:B.OG1/1
U64:A.OP1/1 2.64 THR1102:B.OG1/1
U64:A.O4'/1 2.98 THR62:B.OG1/1
U64:A.O2'/1 2.36 GLU57:B.O/1
A65:A.OP1/1 3.28 GLU57:B.N/1
A65:A.O2'/1 2.71 HIS721:B.NE2/1
C67:A.OP1/1 2.66 GLN739:B.NE2/1
C67:A.OP1/1 2.5 LYS742:B.NZ/1
C67:A.OP2/1 2.19 LYS1097:B.NZ/1
C67:A.N3/1 2.68 VAL1100:B.N/1
C67:A.N4/1 2.44 VAL1100:B.O/1
A68:A.O2'/1 3.18 HIS1349:B.ND1/1
G81:A.N2/1 2.81 LYS33:B.O/1
G81:A.N2/1 2.7 GLU1357:B.O/1
G89:A.O6/1 2.26 GLN1272:B.NE2/1
U90:A.N3/1 2.64 GLU1225:B.O/1
U90:A.O4/1 3.03 GLU1225:B.O/1
U90:A.O4/1 2.74 ALA1227:B.N/1
C91:A.N4/1 2.88 ASN46:B.OD1/1
G92:A.OP2/1 3.07 LYS44:B.N/1
G92:A.N7/1 3.2 LYS44:B.NZ/1
G92:A.O6/1 2.33 LYS44:B.NZ/1
G93:A.O6/1 2.36 LYS44:B.NZ/1
DT7:C.O2/1 3.12 LYS1107:B.NZ/1
DT9:C.OP1/1 3.15 GLU1108:B.N/1
DT9:C.OP2/1 2.65 GLU1108:B.N/1
DT9:C.OP2/1 2.52 SER1109:B.N/1
DT9:C.OP2/1 2.58 SER1109:B.OG/1
DA18:C.O3'/1 3.1 ASN497:B.ND2/1
DA19:C.OP1/1 3.27 ASN497:B.ND2/1
DT21:C.OP1/1 2.47 GLN926:B.N/1
DG22:C.O3'/1 2.2 ARG895:B.NH1/1
DA23:C.OP1/1 2.41 ARG895:B.NH2/1
DG24:C.OP1/1 2.66 LYS902:B.NZ/1
DG24:C.OP1/1 2.47 ARG905:B.NH1/1
DA5:D.OP1/1 2.74 GLN1221:B.NE2/1
DA5:D.N7/1 3.35 ARG1333:B.NH2/1
DG6:D.OP2/1 2.5 SER1216:B.OG/1
DG6:D.N7/1 3.56 ARG1335:B.NH1/1
DG6:D.O6/1 2.98 ARG1335:B.NH2/1
DA8:D.OP1/1 2.17 ARG1114:B.NH1/1
DA8:D.OP1/1 2.57 SER1116:B.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT7:D.OP2/1 3.08 1401:B/1 2.39 LYS1118:B.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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