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Nucleic atom dist Protein atom
DC711:T.OP1/1 2.89 LYS374:A.NZ/1
DC712:T.OP1/1 2.69 LYS353:A.NZ/1
DC713:T.OP1/1 2.73 ARG284:A.NE/1
DC713:T.OP1/1 2.83 ARG284:A.NH2/1
DG714:T.OP1/1 3.35 GLY285:A.N/1
DG714:T.O3'/1 2.78 LYS287:A.NZ/1
DA715:T.OP1/1 2.77 LYS287:A.NZ/1
DA722:T.OP2/1 3.36 GLN500:A.NE2/1
DC808:P.OP2/1 2.89 LYS451:A.NZ/1
DC808:P.O3'/1 3.21 GLN475:A.OE1/1
DC809:P.OP1/1 2.76 THR473:A.OG1/1
DC809:P.OP1/1 2.87 LYS476:A.NZ/1
DT810:P.OP1/1 2.63 HIS361:A.NE2/1
DT810:P.OP1/1 2.96 TYR501:A.OH/1
DG811:P.OP2/1 3.11 ALA360:A.N/1
DT812:P.OP2/1 3.11 ARG358:A.NH2/1
DC818:P.OP1/1 3.09 ASN255:A.ND2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC712:T.OP2/1 2.55 802:T/1 2.93 LYS353:A.NZ/1
DC712:T.OP2/1 2.98 826:A/1 2.95 ALA355:A.N/1
DC713:T.OP1/1 3.12 719:A/1 2.44 ARG277:A.O/1
DC713:T.OP1/1 3.12 719:A/1 3.04 ARG284:A.NH2/1
DA722:T.OP1/1 3.01 740:A/1 2.82 ASP498:A.O/1
DA722:T.OP1/1 3.01 740:A/1 2.57 ASP498:A.OD1/1
DA722:T.OP1/1 2.83 808:T/1 3.19 GLN500:A.N/1
DA722:T.OP1/1 2.83 808:T/1 3.09 TYR501:A.N/1
DT724:T.OP1/1 2.74 734:A/1 2.53 ASN447:A.ND2/1
DC807:P.O2/1 2.83 801:T/1 3.2 GLN475:A.NE2/1
DC809:P.OP1/1 3.16 786:A/1 2.73 TYR501:A.OH/1
DG811:P.OP1/1 2.72 907:P/1 3.02 ALA360:A.N/1
DG811:P.OP1/1 2.72 907:P/1 2.78 HIS361:A.N/1
DG811:P.OP1/1 2.72 907:P/1 2.97 HIS361:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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