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Nucleic atom dist Protein atom
U36:I.O3'/1 2.95 ASN306:A.ND2/1
G39:I.O3'/1 3.01 ASN252:A.ND2/1
G39:I.O2'/1 2.97 ASN252:A.ND2/1
A40:I.OP1/1 2.61 ASN253:A.N/1
A40:I.OP2/1 2.85 ASN252:A.N/1
A40:I.N7/1 3.18 ASN253:A.ND2/1
A40:I.N6/1 3.12 ASN216:A.OD1/1
A42:I.O2'/1 3.07 LYS290:A.NZ/1
A42:I.N6/1 2.85 ASP288:A.OD2/1
C43:I.OP2/1 2.75 LYS290:A.NZ/1
C43:I.N3/1 2.76 GLU211:A.OE2/1
C43:I.N4/1 2.86 GLU211:A.OE1/1
A44:I.O3'/1 3.28 LYS239:A.NZ/1
A44:I.O2'/1 2.95 LYS239:A.NZ/1
A44:I.O2'/1 3.22 ASN241:A.ND2/1
U46:I.O2/1 2.4 ARG159:A.NH2/1
U46:I.N3/1 2.46 ASN123:A.OD1/1
U46:I.O4/1 3.06 ASN123:A.ND2/1
A47:I.O2'/1 3.1 ASN123:A.N/1
A47:I.O2'/1 2.87 ARG159:A.O/1
C48:I.OP1/1 2.76 ARG159:A.N/1
C48:I.OP2/1 2.96 ARG201:A.NH1/1
C48:I.N3/1 2.99 THR202:A.N/1
C48:I.N4/1 2.79 THR202:A.OG1/1
A49:I.OP1/1 3.05 ARG201:A.NH1/1
A49:I.O4'/1 3.12 TRP120:A.NE1/1
A49:I.N3/1 2.39 TYR162:A.OH/1
G50:I.N7/1 2.34 ARG148:A.NE/1
G50:I.O6/1 2.83 ARG148:A.NH2/1
G50:I.N2/1 3.04 TYR162:A.OH/1
A51:I.OP1/1 3.15 SER151:A.N/1
A51:I.OP2/1 2.67 ARG158:A.NH2/1
G52:I.N7/1 3.28 ARG38:A.NE/1
G52:I.N7/1 3.05 ARG38:A.NH2/1
G52:I.O6/1 2.65 ARG38:A.NE/1
G52:I.N2/1 3.3 ASN31:A.O/1
G52:I.N2/1 2.67 ASN31:A.OD1/1
G55:I.O6/1 2.64 LYS289:A.N/1
U57:I.N3/1 2.86 PHE154:A.O/1
C58:I.OP1/1 3.19 ARG295:A.NE/1
C58:I.OP2/1 2.68 LYS299:A.NZ/1
C58:I.O2/1 3.34 ARG153:A.NE/1
C58:I.O2/1 3.18 ARG153:A.NH2/1
C58:I.N4/1 2.83 ARG153:A.O/1
A91:I.N3/1 3 SER283:A.OG/1
C92:I.O2/1 3.16 ASN216:A.ND2/1
U109:I.N3/1 2.97 ASN37:D.OD1/1
U109:I.O4/1 2.73 ASN37:D.ND2/1
U110:I.O2'/1 2.85 ARG63:B.NH2/1
U110:I.N3/1 3.5 ASN35:H.ND2/1
U110:I.O4/1 3.4 ASN35:H.ND2/1
U111:I.O2/1 2.95 SER65:B.N/1
U111:I.N3/1 2.87 ASN37:B.OD1/1
U111:I.O4/1 2.43 ASN37:B.ND2/1
U112:I.O3'/1 2.62 ARG74:F.NH2/1
U112:I.O2'/1 2.97 ARG74:F.NH1/1
U112:I.O2'/1 3.12 ARG74:F.NH2/1
U112:I.N3/1 2.67 ASN38:C.OD1/1
U112:I.O4/1 2.63 ASN38:C.ND2/1
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Nucleic atom d_n2w water d_p2w Protein atom
A47:I.OP1/1 2.69 308:I/1 3.06 ARG201:A.NH2/1
C48:I.OP2/1 2.9 308:I/1 3.06 ARG201:A.NH2/1
C58:I.N4/1 3.01 314:I/1 3.01 ARG153:A.O/1
U111:I.O2'/1 2.78 201:H/1 2.73 ASN33:H.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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