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Nucleic atom dist Protein atom
DG2:E.OP2/1 2.96 GLU427:D.OE2/1
DG2:E.O6/1 2.52 ARG430:D.NH1/1
DG4:E.OP1/1 2.59 HIS401:D.ND1/1
DG4:E.N7/1 2.95 ARG424:D.NH1/1
DG4:E.O6/1 2.87 ARG424:D.NH2/1
DG6:E.OP2/1 2.79 SER393:D.OG/1
DG6:E.O3'/1 3.48 ARG376:D.NH1/1
DG6:E.N7/1 2.82 HIS397:D.NE2/1
DG7:E.OP1/1 2.79 HIS373:D.ND1/1
DG7:E.N7/1 2.97 ARG394:D.NH1/1
DG7:E.O6/1 3 ARG394:D.NH2/1
DG8:E.N7/1 3.03 ARG372:D.NH2/1
DG8:E.O6/1 3.02 ARG372:D.NH1/1
DA9:E.N7/1 2.91 GLN369:D.NE2/1
DG10:E.N7/1 3.02 ARG366:D.NH1/1
DG10:E.O6/1 2.75 ARG366:D.NH2/1
DT11:E.O4/1 3.37 ARG366:D.NH1/1
DA4:F.N6/1 2.97 ASP368:D.OD2/1
DC7:F.N4/1 2.77 ASP396:D.OD2/1
DA10:F.N6/1 3.37 ARG424:D.NH2/1
DA10:F.N6/1 3.05 ASP426:D.OD2/1
DG12:F.O6/1 3 ARG430:D.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT5:E.OP2/1 2.91 102:E/1 3.08 SER393:D.N/1
DT6:F.OP2/1 2.51 101:F/1 3.16 SER395:D.OG/1
DT6:F.O4/1 3.05 604:D/1 2.89 ARG372:D.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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