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Nucleic atom dist Protein atom
DC4:K.OP2/1 2.68 LYS198:J.N/1
DT5:K.OP1/1 2.84 HIS293:J.NE2/1
DA6:K.N7/1 2.76 GLN202:J.NE2/1
DA6:K.N6/1 2.92 GLN202:J.OE1/1
DA6:K.N6/1 3.2 GLN202:J.NE2/1
DA7:K.OP2/1 2.83 THR252:J.OG1/1
DA7:K.N7/1 3.34 GLN204:J.OE1/1
DC9:K.OP2/1 3.23 ARG232:J.NH2/1
DC9:K.O5'/1 3.25 ARG232:J.NH2/1
DT16:K.OP2/1 2.99 HIS57:J.N/1
DA17:K.OP2/1 3.05 GLU29:J.OE1/1
DG18:K.O6/1 2.94 ARG83:J.NH2/1
DG19:K.OP1/1 3.2 LEU145:J.N/1
DG19:K.OP2/1 2.56 ASN144:J.ND2/1
DG19:K.N7/1 2.94 ARG53:J.NH1/1
DG19:K.O6/1 2.76 ARG53:J.NH1/1
DG19:K.O6/1 3.13 ARG83:J.NH1/1
DG21:K.O6/1 3.23 ARG49:J.NH1/1
DG21:K.O6/1 3.04 ARG51:J.NH1/1
DG21:K.O6/1 3.08 ARG51:J.NH2/1
DA3:L.OP2/1 3.33 ARG42:J.NH1/1
DA3:L.O3'/1 3.44 LYS125:J.NZ/1
DA4:L.OP1/1 3.24 LYS125:J.NZ/1
DA4:L.OP1/1 3.13 HIS127:J.NE2/1
DA4:L.OP2/1 3 HIS127:J.NE2/1
DT5:L.OP1/1 3.03 LEU89:J.N/1
DG6:L.N7/1 3.33 ARG49:J.NH2/1
DG6:L.O6/1 2.72 ARG49:J.NH1/1
DC7:L.N4/1 3.35 ARG49:J.NH1/1
DC7:L.N4/1 3.31 GLU87:J.OE1/1
DC7:L.N4/1 3.17 GLU87:J.OE2/1
DG16:L.OP2/1 3.01 GLU184:J.OE2/1
DA17:L.OP2/1 2.75 SER186:J.OG/1
DA17:L.N7/1 3.34 GLN208:J.NE2/1
DC18:L.OP2/1 3.08 ASN310:J.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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