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Nucleic atom dist Protein atom
DG6:D.O4'/1 2.95 ARG448:A.NH1/1
DC8:D.OP1/1 2.69 THR473:A.OG1/1
DA9:D.OP1/1 3.14 HIS361:A.NE2/1
DA9:D.OP1/1 2.29 TYR501:A.OH/1
DC10:D.O2/1 3.12 ASN418:B.ND2/1
DT11:D.OP1/1 3.03 LYS366:A.NZ/1
DT11:D.OP1/1 2.8 GLN407:A.NE2/1
DT11:D.OP1/1 2.96 GLN394:B.NE2/1
DA12:D.OP1/1 2.73 LYS395:B.N/1
DG13:D.OP1/1 2.67 LYS395:B.NZ/1
DG19:D.OP1/1 3.06 ASN255:A.ND2/1
G3:R.O6/1 2.71 TRP24:A.N/1
A4:R.OP2/1 2.67 ARG78:A.NH1/1
C11:R.O2'/1 3.16 ASN265:A.ND2/1
A15:R.OP1/1 2.8 GLY285:A.N/1
G23:R.O2'/1 2.75 ASP498:A.O/1
G23:R.O2'/1 2.78 GLN500:A.N/1
G23:R.O2'/1 3.32 TRP535:A.NE1/1
C24:R.OP1/1 3.08 ALA538:A.N/1
A25:R.OP2/1 2.73 HIS539:A.NE2/1
U26:R.O2'/1 3.26 ARG448:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA12:D.OP1/1 2.73 206:D/1 2.79 GLU396:B.N/1
DG22:D.OP1/1 3.18 717:A/1 2.63 GLY231:A.N/1
DG22:D.OP1/1 3.18 717:A/1 3.05 GLN242:A.NE2/1
G20:R.N2/1 2.82 207:R/1 3.19 ASN418:B.N/1
G22:R.OP1/1 3.19 203:R/1 3.05 GLN269:B.NE2/1
G23:R.OP1/1 2.55 203:R/1 3.05 GLN269:B.NE2/1
G23:R.N3/1 2.86 721:A/1 2.65 TYR501:A.N/1
C24:R.OP1/1 2.39 201:R/1 2.62 ALA538:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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