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Nucleic atom dist Protein atom
DT4:B.OP1/1 3.36 ARG209:A.NE/1
DT4:B.OP2/1 3.3 ARG209:A.NH2/1
DA5:B.OP2/1 3.29 LYS190:A.N/1
5CM6:B.OP2/1 2.48 SER189:A.OG/1
DT9:B.OP1/1 3.01 ARG209:D.NE/1
DT9:B.OP2/1 3 ARG209:D.NH2/1
DC10:B.OP2/1 3.26 LYS190:D.N/1
DC11:B.OP2/1 2.62 SER189:D.OG/1
DG12:B.N7/1 2.95 ARG188:D.NH2/1
DG12:B.O6/1 2.71 ARG188:D.NH1/1
DG2:C.OP1/1 2.9 LEU170:D.N/1
DG2:C.OP2/1 2.83 SER171:D.N/1
DG2:C.OP2/1 2.73 SER171:D.OG/1
DG2:C.N7/1 2.75 ARG166:D.NH1/1
DG2:C.O6/1 2.82 ARG166:D.NH2/1
DA4:C.OP2/1 2.81 LYS186:A.NZ/1
DA4:C.N7/1 3.14 ARG188:A.NH2/1
DG5:C.O6/1 2.71 ARG188:A.NH1/1
DT6:C.OP1/1 3.19 SER168:A.N/1
DT6:C.OP1/1 2.74 SER168:A.OG/1
DT6:C.OP2/1 2.99 LYS167:A.N/1
DG7:C.OP2/1 3.06 LEU170:A.N/1
DG7:C.N7/1 2.9 ARG166:A.NH1/1
DG7:C.O6/1 2.92 ARG166:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC10:B.N4/1 2.91 405:D/1 2.82 ASP176:D.OD1/1
DC11:B.N4/1 2.98 404:D/1 2.8 ASP176:D.OD1/1
DC1:C.N4/1 2.93 408:D/1 2.92 TYR178:D.OH/1
DG3:C.N7/1 3.22 203:C/1 3.09 ARG166:D.NH1/1
DG3:C.O6/1 2.8 203:C/1 3.09 ARG166:D.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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