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Nucleic atom dist Protein atom
A764:A.OP2/1 2.73 TRP213:C.NE1/1
A764:A.N3/1 2.87 ARG212:C.NH2/1
G780:A.N2/1 3.19 ASP229:C.OD2/1
A781:A.OP1/1 2.53 ARG217:C.NH2/1
A781:A.OP2/1 3.25 ARG217:C.NH1/1
A781:A.N6/1 3.23 ARG212:C.NH2/1
G784:A.OP2/1 3.3 ASN226:C.ND2/1
G784:A.O5'/1 2.82 ASN226:C.ND2/1
G784:A.O4'/1 3.13 ASN226:C.ND2/1
G956:A.OP1/1 3.02 GLY87:N.N/1
G956:A.OP2/1 2.73 LYS86:N.NZ/1
C957:A.OP1/1 3.28 LYS76:N.N/1
C957:A.OP2/1 2.93 LYS76:N.N/1
U1130:A.O4/1 2.44 THR151:D.O/1
C1670:A.O2/1 2.52 HIS134:D.NE2/1
G1673:A.O6/1 3 HIS134:D.ND1/1
C1675:A.O2/1 3.16 THR133:D.OG1/1
C1675:A.O2/1 3.07 HIS134:D.N/1
C1788:A.OP1/1 2.94 ARG221:C.NH2/1
A1789:A.OP1/1 3.16 THR219:C.O/1
A1789:A.OP1/1 2.8 ARG221:C.N/1
A1789:A.OP2/1 2.38 ARG221:C.NH1/1
A1789:A.O3'/1 3.31 THR219:C.N/1
C1790:A.OP1/1 3.1 THR219:C.N/1
C1795:A.O2/1 2.8 LYS253:C.NZ/1
U1796:A.O2'/1 2.72 THR252:C.O/1
U1796:A.O2'/1 2.78 GLY254:C.N/1
G1797:A.O3'/1 3.14 THR257:C.N/1
U1798:A.OP1/1 2.71 THR257:C.N/1
G1824:A.O2'/1 2.61 THR252:C.OG1/1
U1825:A.OP1/1 2.66 HIS230:C.NE2/1
U1825:A.O3'/1 3.03 HIS232:C.ND1/1
U1825:A.O2/1 2.87 LYS253:C.NZ/1
G1826:A.OP1/1 2.58 THR223:C.N/1
G1826:A.OP1/1 3.08 HIS232:C.ND1/1
G1826:A.OP2/1 2.82 GLY222:C.N/1
U1841:A.O2/1 2.87 HIS243:C.NE2/1
C1844:A.O3'/1 3.09 LYS256:C.NZ/1
A1901:A.OP2/1 2.89 LYS253:C.NZ/1
C1902:A.O3'/1 2.65 PHE240:C.O/1
G1903:A.OP1/1 2.94 PHE240:C.O/1
U1971:A.O2/1 2.93 ARG238:C.O/1
U1993:A.O3'/1 3.1 ASP131:D.OD1/1
C1994:A.OP1/1 2.59 ALA132:D.N/1
C1996:A.OP2/1 3.33 ARG128:D.NH2/1
C1997:A.OP2/1 2.79 THR129:D.OG1/1
C1997:A.O5'/1 2.69 THR129:D.OG1/1
A1998:A.OP1/1 3.37 ARG141:D.NH2/1
A1998:A.OP2/1 2.7 ARG141:D.NH1/1
C1999:A.OP1/1 3.19 LYS123:D.NZ/1
G2024:A.O3'/1 2.86 LYS154:D.NZ/1
G2024:A.O2'/1 2.81 LYS154:D.NZ/1
A2052:A.OP1/1 3.42 ILE146:D.N/1
A2052:A.O3'/1 3.29 GLN148:D.O/1
A2052:A.O2'/1 2.69 ASN149:D.O/1
G2053:A.OP1/1 3.01 ASN149:D.OD1/1
C2261:A.OP2/1 2.94 GLU17:X.OE2/1
U2262:A.OP2/1 2.56 SER16:X.OG/1
C2263:A.N4/1 2.85 ASP15:X.OD1/1
C2264:A.N4/1 3.1 ASP15:X.OD2/1
C2275:A.O3'/1 3.24 GLY85:N.N/1
C2275:A.O2'/1 2.75 LYS84:N.N/1
G2276:A.OP2/1 2.88 GLY85:N.N/1
G2276:A.O3'/1 3.27 LYS86:N.N/1
G2277:A.OP1/1 2.81 LYS86:N.N/1
G2277:A.OP2/1 3.25 ASN12:X.ND2/1
A2278:A.OP2/1 2.94 ASN12:X.ND2/1
G2279:A.OP2/1 2.82 ARG11:X.NH2/1
G2279:A.N7/1 2.75 ARG14:X.NH2/1
C2452:A.OP1/1 3.21 HIS253:v.ND1/1
A2453:A.OP1/1 2.79 ARG256:v.NH2/1
U2493:A.OP1/1 3.18 ARG256:v.NH1/1
U2493:A.OP1/1 2.93 GLU258:v.N/1
U2493:A.OP2/1 2.93 ARG256:v.NH1/1
U2493:A.O2/1 2.94 HIS281:v.NE2/1
C2496:A.OP1/1 3.02 MET82:N.N/1
G2508:A.OP1/1 3.01 ARG245:v.NH1/1
U2511:A.O3'/1 2.95 ARG128:D.O/1
U2511:A.O2/1 2.9 SER145:D.N/1
C2512:A.OP1/1 2.59 ARG128:D.N/1
C2512:A.O3'/1 3.29 LYS159:D.NZ/1
C2512:A.O2'/1 2.68 SER145:D.O/1
C2512:A.O2/1 2.74 SER145:D.OG/1
G2553:A.O6/1 2.74 SER247:v.OG/1
G2553:A.O6/1 2.7 GLY248:v.N/1
U2555:A.O2/1 3.23 ARG245:v.NH1/1
U2555:A.N3/1 3.48 ARG245:v.O/1
U2555:A.O4/1 3.07 ARG245:v.O/1
U2571:A.O3'/1 2.67 THR151:D.OG1/1
A2572:A.OP2/1 3.17 THR151:D.N/1
A2572:A.OP2/1 3.13 THR151:D.OG1/1
C2573:A.N3/1 3.06 GLU258:v.OE2/1
C2573:A.N4/1 2.86 ARG256:v.O/1
C2573:A.N4/1 3.12 GLU258:v.OE2/1
G2574:A.N2/1 2.79 GLY147:D.O/1
C2575:A.OP1/1 2.82 ASN149:D.ND2/1
G2578:A.N2/1 2.97 GLN130:D.NE2/1
C2579:A.O3'/1 3.04 SER137:D.OG/1
C2579:A.O2'/1 2.78 ASN136:D.ND2/1
G2583:A.N2/1 2.88 ASN255:v.OD1/1
A2590:A.O3'/1 2.7 ARG238:C.NH1/1
C2591:A.OP1/1 3.05 ARG238:C.NH1/1
C2591:A.OP2/1 3.1 ARG238:C.N/1
G2595:A.O6/1 3.33 ASN239:C.ND2/1
U2596:A.O2'/1 2.74 GLY241:C.O/1
G2597:A.O3'/1 3.26 LYS242:C.NZ/1
G2599:A.OP2/1 2.83 GLY235:C.N/1
G2599:A.N7/1 2.88 GLU236:C.N/1
G2599:A.O6/1 3.27 ASN239:C.OD1/1
G2618:A.O2'/1 2.74 VAL155:D.N/1
G2618:A.O2'/1 2.56 VAL155:D.O/1
C2619:A.O3'/1 3.23 GLY158:D.N/1
C2620:A.OP1/1 2.84 GLY158:D.N/1
C2620:A.O2'/1 2.65 ALA162:D.O/1
C0:x.O2/1 2.8 LYS282:v.NZ/1
C74:x.O5'/1 2.77 ARG278:v.NH2/1
C75:x.OP2/1 2.82 ARG278:v.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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