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Nucleic atom dist Protein atom
DA4:C.OP2/1 2.8 LYS42:A.NZ/1
5CM6:C.O5'/1 3.05 SER24:A.O/1
5CM6:C.OP1/1 2.15 SER24:A.OG/1
5CM6:C.OP1/1 3.01 SER24:A.N/1
5CM6:C.OP1/1 2.73 SER24:A.OG/1
5CM6:C.OP2/1 3.16 ARG23:A.N/1
DG7:C.OP1/1 3.04 LEU26:A.N/1
DG7:C.OP2/1 3.09 SER27:A.N/1
DG7:C.OP2/1 2.69 SER27:A.OG/1
DG7:C.N7/1 2.85 ARG22:A.NH1/1
DG7:C.O6/1 2.99 ARG22:A.NH2/1
5CM6:D.OP2/1 2.55 SER45:A.OG/1
DG7:D.N7/1 3.06 ARG44:A.NH2/1
DG7:D.O6/1 2.66 ARG44:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG5:D.OP2/1 2.49 201:D/1 2.79 LYS46:A.N/1
5CM6:D.OP1/1 2.63 203:D/1 2.76 ARG51:A.NH2/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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