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Nucleic atom dist Protein atom
DA4:E.OP2/1 2.72 LYS42:B.NZ/1
DG5:E.OP2/1 3.28 ARG3:B.NH1/1
5CM6:E.OP1/1 2.75 SER24:B.N/1
5CM6:E.OP1/1 2.7 SER24:B.N/1
DG7:E.OP1/1 3.11 LEU26:B.N/1
DG7:E.OP2/1 3.06 SER27:B.N/1
DG7:E.OP2/1 2.7 SER27:B.OG/1
DG7:E.N7/1 2.83 ARG22:B.NH1/1
DG7:E.O6/1 2.88 ARG22:B.NH2/1
5CM6:F.OP2/1 2.51 SER45:B.OG/1
DG7:F.N7/1 2.99 ARG44:B.NH2/1
DG7:F.O6/1 2.68 ARG44:B.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG5:E.OP2/1 2.64 102:E/1 2.76 ARG3:B.NH1/1
DG5:E.OP2/1 2.64 102:E/1 2.78 ARG3:B.NH2/1
DG5:F.OP2/1 2.64 202:F/1 2.8 LYS46:B.N/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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