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Nucleic atom dist Protein atom
DT6:T.OP2/1 2.83 LYS280:A.NZ/1
DT6:T.O2/1 2.98 ARG283:A.NH1/1
DG7:T.OP1/1 2.72 THR292:A.OG1/1
DC8:T.OP1/1 2.86 ASN294:A.ND2/1
DG9:T.OP1/1 2.52 TYR296:A.OH/1
DG9:T.N3/1 3.37 LYS234:A.NZ/1
DC10:T.OP1/1 2.96 THR233:A.N/1
DC10:T.OP1/1 2.89 LYS234:A.N/1
DA11:T.OP1/1 2.98 LYS230:A.N/1
DA11:T.OP1/1 3.1 LYS230:A.O/1
DC8:P.OP1/1 3.05 GLY107:A.N/1
DC8:P.OP1/1 2.89 ALA110:A.N/1
DC8:P.OP2/1 2.98 SER109:A.N/1
DG9:P.OP1/1 2.72 GLY105:A.N/1
DOC10:P.OP1/1 3.04 ARG254:A.NE/1
DOC10:P.OP1/1 2.31 ARG254:A.NH2/1
DG1:D.OP1/1 2.73 LYS68:A.NZ/1
DT2:D.OP1/1 2.84 GLY66:A.N/1
DT2:D.OP1/1 3 ILE69:A.N/1
DT2:D.OP2/1 3.14 LYS68:A.N/1
DC3:D.OP1/1 2.7 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG7:T.OP1/1 2.8 564:A/1 2.73 ARG283:A.O/1
DG7:T.OP1/1 2.8 564:A/1 3.09 ILE293:A.N/1
DG7:T.N2/1 2.96 554:A/1 2.81 ARG258:A.NH2/1
DG7:T.N2/1 2.96 554:A/1 2.67 GLU295:A.OE2/1
DG7:T.N3/1 3.02 522:A/1 2.81 ARG283:A.NH1/1
DG7:T.N3/1 3.02 522:A/1 3.2 ARG283:A.NH2/1
DG7:T.N3/1 3.02 522:A/1 2.53 GLU295:A.OE1/1
DG9:T.O4'/1 2.61 107:T/1 3.08 ARG258:A.NH2/1
DG9:T.N2/1 3.05 121:T/1 3.27 SER229:A.OG/1
DG9:T.N2/1 3.05 121:T/1 3.15 LYS234:A.NZ/1
DC10:T.OP2/1 2.73 111:T/1 2.96 GLU232:A.N/1
DT12:T.OP1/1 2.52 106:T/1 2.93 HIS134:A.N/1
DT12:T.OP1/1 3.03 120:T/1 3.08 HIS135:A.N/1
DG7:P.OP1/1 2.99 547:A/1 2.62 GLN31:A.NE2/1
DG9:P.OP2/1 2.73 102:P/1 2.9 THR101:A.O/1
DG9:P.N3/1 2.78 510:A/1 2.35 LYS234:A.NZ/1
DOC10:P.OP1/1 2.91 551:A/1 2.64 SER104:A.OG/1
DOC10:P.OP1/1 2.91 551:A/1 2.84 ARG254:A.NE/1
DG1:D.OP1/1 3.1 503:A/1 2.97 LYS68:A.NZ/1
DG1:D.OP1/1 3.1 503:A/1 2.23 LYS72:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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