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Nucleic atom dist Protein atom
DA5:C.OP1/1 3.17 ARG454:A.NH2/1
DT6:C.OP1/1 3.39 THR473:A.N/1
DT6:C.OP2/1 2.57 THR473:A.OG1/1
DA7:C.OP2/1 2.74 ALA471:A.N/1
DC8:C.OP2/1 3.07 THR469:A.N/1
DC8:C.OP2/1 3.12 ARG470:A.NH1/1
DA11:C.OP1/1 3.14 GLY358:A.N/1
DA11:C.OP1/1 2.86 THR361:A.N/1
DA11:C.OP1/1 2.57 THR361:A.OG1/1
DA11:C.OP2/1 3.08 VAL360:A.N/1
DC12:C.OP1/1 2.81 GLY356:A.N/1
DC13:C.O3'/1 2.3 SER196:A.OG/1
DC13:C.O3'/1 3.17 ASP198:A.OD1/1
DT2:D.N3/1 2.78 ILE166:B.O/1
DT2:D.O4/1 3.08 ILE166:B.N/1
DC4:D.OP1/1 2.69 ARG507:A.NH1/1
DC4:D.N4/1 3.03 THR44:A.OG1/1
DT5:D.OP1/1 2.94 ARG507:A.NH1/1
DG6:D.OP1/1 2.97 THR421:A.N/1
DG6:D.OP2/1 2.54 THR421:A.OG1/1
DG7:D.OP2/1 2.81 GLU419:A.N/1
DG7:D.OP2/1 3.23 GLU419:A.O/1
DT8:D.OP1/1 2.54 ARG413:A.NH1/1
DT8:D.OP2/1 2.76 SER417:A.N/1
DA9:D.OP1/1 3.12 LYS414:A.N/1
DA9:D.OP2/1 2.89 SER415:A.N/1
DT12:D.OP1/1 2.59 SER391:A.OG/1
DT12:D.OP2/1 2.44 SER388:A.OG/1
DA5:P.OP1/1 2.62 ARG454:B.NH2/1
DT6:P.OP2/1 2.55 THR473:B.OG1/1
DA7:P.OP2/1 2.75 ALA471:B.N/1
DC8:P.OP2/1 3.06 THR469:B.N/1
DA11:P.OP1/1 2.96 GLY358:B.N/1
DA11:P.OP1/1 3.05 THR361:B.N/1
DA11:P.OP1/1 2.72 THR361:B.OG1/1
DA11:P.OP2/1 2.81 VAL360:B.N/1
DC12:P.OP1/1 2.87 GLY356:B.N/1
DC13:P.OP1/1 2.52 LYS321:B.NZ/1
DC13:P.O3'/1 2.67 SER196:B.OG/1
DT2:T.N3/1 2.63 ILE166:A.O/1
DT2:T.O4/1 3.11 ILE166:A.N/1
DC4:T.OP1/1 2.6 ARG507:B.NH1/1
DC4:T.N4/1 2.98 THR44:B.OG1/1
DT5:T.OP1/1 2.97 ARG507:B.NH1/1
DG6:T.OP1/1 2.96 THR421:B.N/1
DG6:T.OP2/1 2.57 THR421:B.OG1/1
DG7:T.OP2/1 2.85 GLU419:B.N/1
DT8:T.OP1/1 2.44 ARG413:B.NH1/1
DT8:T.OP2/1 2.71 SER417:B.N/1
DA9:T.OP1/1 2.77 LYS414:B.N/1
DA9:T.OP2/1 3.04 SER415:B.N/1
DT12:T.OP1/1 2.63 SER391:B.OG/1
DT12:T.OP2/1 2.51 SER388:B.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT6:C.OP1/1 2.45 101:C/1 2.7 ALA471:A.O/1
DA7:C.OP1/1 3.13 810:A/1 2.8 ALA471:A.O/1
DA7:C.OP2/1 2.82 751:A/1 2.67 THR469:A.OG1/1
DC12:C.OP1/1 2.81 779:A/1 2.73 ARG352:A.O/1
DC12:C.OP1/1 2.81 779:A/1 2.87 VAL354:A.O/1
DC12:C.OP1/1 2.81 779:A/1 2.86 ILE357:A.O/1
DT5:D.OP1/1 2.66 741:A/1 2.86 THR421:A.OG1/1
DT5:D.OP1/1 2.66 741:A/1 2.64 LYS461:A.NZ/1
DT5:D.OP1/1 2.66 741:A/1 3.07 ARG507:A.NE/1
DT5:D.OP2/1 2.8 763:A/1 2.7 LYS461:A.NZ/1
DT5:D.O4/1 2.72 208:D/1 2.93 ARG18:A.NH2/1
DG6:D.OP1/1 2.7 205:D/1 2.89 THR421:A.O/1
DG6:D.OP2/1 2.59 716:A/1 2.53 GLU419:A.OE2/1
DG7:D.OP1/1 2.44 201:D/1 2.9 SER417:A.O/1
DG7:D.OP1/1 3.23 826:A/1 2.83 ARG420:A.NH2/1
DG7:D.OP2/1 3.01 708:A/1 2.43 SER417:A.OG/1
DG7:D.OP2/1 3.01 708:A/1 3.2 GLU419:A.OE1/1
DG7:D.N7/1 2.76 211:D/1 2.94 GLU419:A.OE2/1
DT8:D.OP2/1 3.04 729:A/1 2.59 SER415:A.OG/1
DT12:D.OP1/1 2.78 772:A/1 2.71 SER388:A.N/1
DA13:D.OP1/1 2.93 765:A/1 2.7 ARG63:A.NE/1
DT6:P.OP1/1 2.63 102:P/1 2.76 ALA471:B.O/1
DA7:P.OP2/1 2.89 791:B/1 2.85 THR469:B.OG1/1
DC12:P.OP1/1 2.7 729:B/1 2.65 ARG352:B.O/1
DC12:P.OP1/1 2.7 729:B/1 3.09 ARG352:B.NH2/1
DC12:P.OP1/1 2.7 729:B/1 2.81 VAL354:B.O/1
DC12:P.OP1/1 2.7 729:B/1 2.69 ILE357:B.O/1
DA3:T.N3/1 2.91 117:T/1 2.99 SER134:B.OG/1
DC4:T.N3/1 2.53 104:T/1 3.02 THR44:B.OG1/1
DC4:T.N4/1 3.06 742:B/1 2.71 ALA43:B.O/1
DT5:T.OP1/1 2.59 106:T/1 2.77 THR421:B.OG1/1
DT5:T.OP1/1 2.59 106:T/1 2.85 LYS461:B.NZ/1
DT5:T.OP1/1 2.59 106:T/1 3.04 ARG507:B.NE/1
DT5:T.OP2/1 2.8 775:B/1 2.79 LYS461:B.NZ/1
DG6:T.OP1/1 3.18 828:B/1 3.03 THR421:B.O/1
DG6:T.OP2/1 2.72 702:B/1 2.4 GLU419:B.OE2/1
DG7:T.OP1/1 2.54 105:T/1 2.76 SER417:B.O/1
DG7:T.OP2/1 2.96 716:B/1 2.57 SER417:B.OG/1
DG7:T.N7/1 2.86 793:B/1 2.85 GLU419:B.OE2/1
DT8:T.OP2/1 3.08 789:B/1 2.84 SER415:B.OG/1
DT8:T.OP2/1 3.08 789:B/1 3.03 SER417:B.OG/1
DT12:T.OP1/1 2.75 111:T/1 3.18 SER388:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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