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Nucleic atom dist Protein atom
DA6:T.OP2/1 3.1 LYS280:A.NZ/1
DA6:T.N3/1 3.16 ARG283:A.NH1/1
DG7:T.OP1/1 2.52 THR292:A.OG1/1
DC8:T.OP1/1 3 ASN294:A.ND2/1
DG9:T.OP1/1 2.61 TYR296:A.OH/1
DG9:T.N3/1 3.05 LYS234:A.NZ/1
DC10:T.OP1/1 2.93 THR233:A.N/1
DC10:T.OP1/1 2.86 LYS234:A.N/1
DA11:T.OP1/1 3.04 LYS230:A.N/1
DC8:P.OP1/1 3.02 GLY107:A.N/1
DC8:P.OP1/1 2.79 ALA110:A.N/1
DC8:P.OP2/1 2.95 SER109:A.N/1
DG9:P.OP1/1 2.75 GLY105:A.N/1
DOC10:P.OP1/1 2.22 ARG254:A.NH2/1
DG1:D.OP1/1 2.48 LYS68:A.NZ/1
DT2:D.OP1/1 2.91 GLY66:A.N/1
DT2:D.OP1/1 2.84 ILE69:A.N/1
DT2:D.OP2/1 3.17 LYS68:A.N/1
DC3:D.OP1/1 2.82 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG7:T.OP1/1 2.77 116:T/1 2.8 ARG283:A.O/1
DG7:T.OP1/1 2.77 116:T/1 3.04 ILE293:A.N/1
DG7:T.N2/1 3.05 598:A/1 2.73 GLU295:A.OE2/1
DG7:T.N3/1 3.01 534:A/1 2.81 ARG283:A.NH1/1
DG7:T.N3/1 3.01 534:A/1 2.57 GLU295:A.OE1/1
DC8:T.OP1/1 2.81 123:T/1 2.94 ARG299:A.NH2/1
DC8:T.O2/1 3.19 598:A/1 2.73 GLU295:A.OE2/1
DG9:T.O4'/1 3.27 548:A/1 2.62 LYS234:A.NZ/1
DG9:T.N2/1 3.08 134:T/1 3.26 SER229:A.OG/1
DC10:T.OP2/1 2.77 115:T/1 2.94 GLU232:A.N/1
DC10:T.OP2/1 2.58 108:T/1 2.99 THR233:A.OG1/1
DA11:T.OP2/1 2.41 103:T/1 2.55 LYS230:A.O/1
DA11:T.O3'/1 3 113:T/1 3.15 HIS135:A.N/1
DT12:T.OP1/1 2.44 104:T/1 2.97 HIS134:A.N/1
DT12:T.OP1/1 2.7 113:T/1 3.15 HIS135:A.N/1
DG9:P.OP2/1 2.58 208:P/1 3.14 THR101:A.O/1
DG9:P.N3/1 2.69 211:P/1 3.01 LYS234:A.NZ/1
DG1:D.OP1/1 2.92 559:A/1 2.77 TYR39:A.OH/1
DG1:D.OP1/1 2.92 559:A/1 2.64 LYS72:A.NZ/1
DC3:D.OP2/1 2.66 202:D/1 3.28 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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