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Nucleic atom dist Protein atom
DG6:T.N2/1 3.28 ARG283:A.NH1/1
DG6:T.N3/1 3.29 ARG283:A.NH1/1
DT7:T.OP1/1 2.61 THR292:A.OG1/1
DC8:T.OP1/1 2.92 ASN294:A.ND2/1
DG9:T.OP1/1 2.57 TYR296:A.OH/1
DC10:T.OP1/1 2.95 THR233:A.N/1
DC10:T.OP1/1 2.87 LYS234:A.N/1
DA11:T.OP1/1 3.1 LYS230:A.N/1
DC8:P.OP1/1 3.22 GLY107:A.N/1
DC8:P.OP1/1 2.87 ALA110:A.N/1
DC8:P.OP2/1 2.84 SER109:A.N/1
DG9:P.OP1/1 2.89 GLY105:A.N/1
2DA10:P.OP1/1 3.05 ARG254:A.NH2/1
DG1:D.OP2/1 2.92 LYS68:A.NZ/1
DT2:D.OP1/1 2.86 GLY66:A.N/1
DT2:D.OP1/1 2.95 ILE69:A.N/1
DT2:D.OP2/1 3.21 LYS68:A.N/1
DC3:D.OP1/1 2.89 GLY64:A.N/1
DC406:A.O2/1 2.84 LYS262:A.NZ/1
DC406:A.N3/1 2.75 THR196:A.OG1/1
DC406:A.N4/1 3.21 ILE174:A.O/1
DC406:A.N4/1 2.9 THR176:A.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:T.OP1/1 3.15 552:A/1 2.62 HIS34:A.ND1/1
DG6:T.OP1/1 3.15 552:A/1 3.03 ASN37:A.ND2/1
DG6:T.N7/1 3.06 744:A/1 2.97 ASN37:A.ND2/1
DT7:T.OP1/1 2.68 210:T/1 3.03 ARG283:A.O/1
DT7:T.OP1/1 2.68 210:T/1 3.05 ILE293:A.N/1
DT7:T.O2/1 2.87 525:A/1 2.9 ARG283:A.NH1/1
DT7:T.O2/1 2.87 525:A/1 2.52 GLU295:A.OE2/1
DC8:T.O2/1 2.91 535:A/1 2.58 GLU295:A.OE1/1
DG9:T.N2/1 3.17 632:A/1 3 SER229:A.OG/1
DG9:T.N2/1 3.17 632:A/1 2.77 LYS234:A.NZ/1
DC10:T.OP2/1 2.81 218:T/1 2.92 GLU232:A.N/1
DC10:T.OP2/1 2.81 218:T/1 2.91 GLU232:A.N/1
DC10:T.OP2/1 2.61 207:T/1 2.99 THR233:A.OG1/1
DA11:T.OP1/1 2.93 223:T/1 2.93 LYS230:A.O/1
DA11:T.OP2/1 2.91 637:A/1 2.77 LYS230:A.O/1
DT12:T.OP1/1 2.6 205:T/1 2.93 HIS134:A.N/1
DT12:T.OP1/1 3.03 232:T/1 3.08 HIS135:A.N/1
DG7:P.OP1/1 2.86 678:A/1 2.84 GLN31:A.NE2/1
DG9:P.OP2/1 2.58 502:P/1 3.09 THR101:A.O/1
DG9:P.N3/1 2.8 505:P/1 3.06 LYS234:A.NZ/1
2DA10:P.O4'/1 2.77 505:P/1 3.06 LYS234:A.NZ/1
DG1:D.OP1/1 2.72 205:D/1 2.85 TYR39:A.OH/1
DG1:D.OP1/1 2.72 205:D/1 2.85 LYS72:A.NZ/1
DG1:D.N2/1 3.18 236:T/1 3.14 HIS34:A.O/1
DC3:D.OP2/1 2.82 208:D/1 3.39 LYS60:A.NZ/1
DC406:A.O2/1 2.83 611:A/1 2.74 LYS262:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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