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Nucleic atom dist Protein atom
A13:2.O2'/1 2.81 GLN121:P.O/1
U27:2.O2'/1 2.56 ALA49:C.O/1
G36:2.OP2/1 2.95 ARG86:h.N/1
A41:2.OP1/1 2.73 TYR66:j.N/1
A41:2.OP1/1 2.45 LEU67:j.N/1
G42:2.OP1/1 2.75 GLY60:j.N/1
G42:2.OP1/1 3.02 GLY62:j.N/1
G42:2.OP2/1 2.42 MET64:j.N/1
U67:2.O3'/1 3.36 ALA86:j.N/1
A72:2.OP1/1 2.94 ARG52:Y.N/1
C91:2.O2'/1 2.85 SER25:Y.N/1
G95:2.O2'/1 2.31 GLY81:j.O/1
U128:2.O3'/1 3.26 GLY10:n.O/1
G140:2.O2'/1 3 ARG109:N.O/1
U147:2.O2'/1 2.42 LEU38:X.N/1
G21:6.O2'/1 2.25 ILE93:t.O/1
U26:6.OP1/1 3.39 GLY196:K.N/1
A34:6.OP1/1 2.64 SER286:K.O/1
A34:6.OP1/1 3.39 VAL288:K.N/1
C37:6.O3'/1 2.57 GLY188:o.O/1
C37:6.O2'/1 3.08 GLY188:o.O/1
U38:6.OP1/1 2.25 ILE189:o.O/1
U38:6.OP1/1 3.11 LYS191:o.N/1
U45:6.O2'/1 1.57 THR243:K.O/1
A53:6.OP1/1 2.7 GLU168:K.N/1
U57:6.O3'/1 2.3 LYS175:o.O/1
U57:6.O2'/1 2.05 GLU174:o.O/1
U57:6.O2'/1 2.39 LYS175:o.O/1
U228:6.OP1/1 3.2 THR171:t.N/1
U2:1.OP2/1 2.08 LYS21:X.N/1
U2:1.OP2/1 1.91 LYS21:X.O/1
A16:1.OP1/1 3.09 ALA43:X.N/1
G17:1.OP1/1 3.14 LYS45:X.N/1
A23:1.OP1/1 3.02 THR44:j.N/1
C29:1.O2'/1 2.89 ARG162:N.O/1
A48:1.OP2/1 2.58 HIS17:L.N/1
G53:1.OP1/1 2.41 ASN48:j.N/1
C69:1.OP1/1 2.79 HIS178:N.N/1
G74:1.O2'/1 2.56 ARG59:L.O/1
G75:1.OP1/1 3.37 ARG59:L.N/1
G76:1.OP1/1 2.99 ARG73:L.N/1
G76:1.OP2/1 3.26 ARG73:L.N/1
U97:1.OP2/1 3.22 ASN12:L.O/1
A116:1.OP1/1 3.21 GLY2:N.N/1
A116:1.O3'/1 3.11 GLY2:N.N/1
C135:1.O2'/1 2.6 PHE95:h.N/1
U146:1.O2'/1 2.8 TYR134:G.O/1
U147:1.OP2/1 3.07 SER195:G.O/1
U149:1.OP1/1 2.54 ALA55:N.N/1
G161:1.OP1/1 3.33 LYS263:m.N/1
C163:1.OP1/1 3.13 GLY213:v.N/1
A198:1.O3'/1 2.92 GLY61:Y.N/1
A199:1.OP1/1 2.79 GLY61:Y.N/1
U210:1.OP2/1 2.83 THR162:C.N/1
G212:1.OP2/1 2.46 ALA2:Y.N/1
G212:1.O2'/1 2.6 ASN221:C.O/1
A213:1.OP1/1 3.03 ALA2:Y.N/1
G229:1.OP1/1 2.45 GLN4:Y.N/1
G229:1.OP1/1 2.44 SER5:Y.N/1
C263:1.O3'/1 3.35 ALA258:m.N/1
G264:1.OP1/1 3.12 ALA258:m.N/1
U286:1.O2'/1 2.59 LYS179:N.O/1
G290:1.OP1/1 2.95 LEU98:N.N/1
G290:1.O3'/1 3.32 GLY69:N.N/1
C293:1.O2'/1 2.19 ARG76:i.O/1
U298:1.O4'/1 3.24 GLY31:i.O/1
G333:1.OP1/1 2.87 ALA17:v.N/1
G333:1.O2'/1 2.78 ARG19:v.N/1
G333:1.O2'/1 3.03 ARG19:v.O/1
A336:1.OP1/1 3 SER10:Y.N/1
A338:1.OP1/1 3.31 GLN48:C.N/1
A344:1.OP1/1 3.02 GLY96:C.N/1
C346:1.OP1/1 2.78 SER53:C.N/1
G347:1.OP1/1 3.39 GLY57:C.N/1
C356:1.O2'/1 2.47 GLY81:C.O/1
G364:1.OP1/1 3.23 SER61:C.N/1
C379:1.O2'/1 1.94 VAL56:x.O/1
A385:1.OP1/1 2.06 HIS31:x.O/1
A385:1.O3'/1 1.65 ASN27:x.O/1
A391:1.O2'/1 2.56 THR57:x.O/1
A391:1.O2'/1 2.06 GLN58:x.O/1
U429:1.O2'/1 2.59 ASN88:f.O/1
U502:1.OP1/1 3.22 LYS29:E.N/1
A516:1.OP1/1 3.23 ALA344:C.N/1
A522:1.O2'/1 2.39 GLU66:S.O/1
A523:1.O5'/1 2.87 ALA67:S.O/1
C525:1.OP1/1 2.75 THR78:M.N/1
A578:1.O2'/1 2.47 ALA331:C.O/1
G584:1.O2'/1 2.86 THR72:f.O/1
G591:1.O2'/1 3.07 ALA16:E.O/1
C593:1.OP1/1 1.84 LYS20:E.N/1
A607:1.OP1/1 2.17 ALA24:E.N/1
A607:1.OP1/1 2.91 ALA24:E.O/1
G632:1.OP1/1 2.91 ARG94:O.N/1
C633:1.O2'/1 2.44 ARG21:f.O/1
C633:1.O2'/1 3.3 ASN23:f.N/1
C655:1.OP1/1 2.54 ARG27:e.N/1
U664:1.OP1/1 2.79 LYS108:C.N/1
A672:1.OP2/1 3.38 LYS56:Q.N/1
U681:1.OP2/1 3 HIS115:C.N/1
G685:1.O2'/1 2.71 ALA63:v.O/1
C694:1.O2'/1 2.59 ALA231:C.O/1
C696:1.OP1/1 2.55 VAL272:C.N/1
A697:1.O4'/1 3.09 GLY64:v.O/1
C729:1.O3'/1 2.18 ASN136:Q.N/1
C729:1.O3'/1 3.24 THR137:Q.N/1
C729:1.O2'/1 2.85 THR137:Q.O/1
C730:1.OP1/1 2.35 ASN136:Q.N/1
U731:1.OP1/1 3.26 ASN229:4.N/1
G742:1.OP1/1 2.37 GLU74:Q.N/1
C743:1.O2'/1 2.77 ARG141:Q.N/1
C743:1.O2'/1 2.96 ARG141:Q.O/1
A744:1.O3'/1 2.78 GLY142:Q.O/1
A744:1.O3'/1 3.31 ARG144:Q.N/1
A744:1.O2'/1 2.37 GLY142:Q.O/1
C745:1.OP1/1 3.03 ARG144:Q.N/1
U790:1.O3'/1 2.69 LYS112:C.O/1
C840:1.O3'/1 2.71 LYS125:R.O/1
G878:1.O2'/1 2.76 HIS117:l.O/1
U879:1.O5'/1 2.53 ILE99:l.O/1
U879:1.O4'/1 3.26 ALA135:l.O/1
A929:1.O2'/1 2.46 TRP49:j.O/1
C945:1.OP1/1 3.09 LYS34:e.N/1
G947:1.OP1/1 3.03 ILE55:e.N/1
C961:1.O2'/1 2.7 HIS837:w.O/1
U986:1.O2'/1 1.95 ALA122:F.O/1
U990:1.O2'/1 2.91 CYS101:T.N/1
G1145:1.O2'/1 2.61 ARG45:e.O/1
C1146:1.OP1/1 2.42 ARG47:e.N/1
A1159:1.OP2/1 2.94 ILE92:F.N/1
G1161:1.O2'/1 2.88 GLY56:e.N/1
U1167:1.O3'/1 2.84 SER211:F.O/1
U1167:1.O2'/1 2.9 ASN209:F.O/1
U1167:1.O2'/1 2.52 PRO210:F.O/1
U1168:1.OP1/1 2.97 SER211:F.O/1
U1168:1.OP1/1 2.81 GLY212:F.O/1
A1170:1.OP1/1 2.54 LYS219:F.N/1
A1170:1.OP2/1 2.98 PRO217:F.O/1
C1175:1.O2'/1 2.57 MET87:O.O/1
A1180:1.OP1/1 2.98 ASN77:f.N/1
U1214:1.OP1/1 3.13 TYR91:S.N/1
C1279:1.OP1/1 2.73 THR15:W.O/1
C1279:1.O3'/1 3.12 ASP16:W.O/1
C1298:1.O2'/1 1.83 GLN40:r.O/1
U1299:1.O3'/1 3.23 LEU42:r.O/1
U1299:1.O3'/1 3.02 GLY44:r.N/1
U1299:1.O2'/1 2.95 LYS41:r.O/1
U1299:1.O2'/1 2.06 LEU42:r.O/1
G1300:1.OP1/1 2.08 GLY44:r.N/1
G1306:1.O4'/1 3.04 ALA61:O.O/1
U1309:1.OP2/1 2.34 ARG9:s.N/1
C1312:1.O2'/1 2.97 ALA83:O.O/1
C1314:1.OP1/1 3.03 GLY17:O.N/1
C1316:1.OP1/1 3.15 LYS130:O.N/1
C1327:1.O3'/1 3.24 GLY76:f.N/1
C1328:1.OP1/1 3.24 GLY76:f.N/1
C1333:1.O2'/1 2.38 LEU207:F.O/1
C1339:1.OP1/1 2.65 LYS61:e.N/1
U1347:1.OP1/1 2.85 GLY303:C.N/1
U1351:1.O4'/1 2.33 PHE104:3.N/1
A1352:1.O4'/1 2.62 GLN41:3.O/1
U1353:1.O2'/1 2.16 LYS8:E.O/1
C1359:1.O2'/1 2.97 GLN307:C.N/1
G1362:1.O3'/1 3.24 ARG160:F.O/1
G1362:1.O2'/1 3.24 ARG160:F.N/1
G1380:1.OP1/1 2.51 LYS191:C.N/1
G1382:1.O2'/1 2.97 GLY241:C.N/1
U1384:1.OP1/1 2.95 ARG203:C.N/1
C1385:1.O2'/1 2.93 SER2:E.N/1
G1389:1.OP1/1 3.3 SER101:e.N/1
G1392:1.OP1/1 3.17 ALA102:e.N/1
G1404:1.OP1/1 2.6 PHE65:e.N/1
U1405:1.OP1/1 3.15 SER59:e.N/1
A1407:1.OP1/1 3.3 TRP32:e.N/1
C1411:1.OP1/1 2.51 HIS98:e.N/1
G1413:1.OP1/1 2.56 ARG125:e.N/1
G1422:1.O2'/1 2.17 GLN4:E.N/1
U1438:1.O2'/1 2.71 ARG95:C.N/1
U1471:1.O2'/1 2.98 LEU4:R.N/1
G1473:1.OP1/1 3.34 LEU24:R.N/1
A1524:1.OP1/1 3.19 THR112:X.N/1
C1527:1.O2'/1 2.76 ARG10:g.N/1
U1570:1.O2'/1 2.83 PHE280:t.O/1
C1597:1.O3'/1 3.04 GLY27:g.N/1
A1602:1.OP2/1 2.76 ARG38:R.N/1
A1613:1.OP1/1 2.2 ALA2:k.N/1
A1613:1.OP1/1 3.08 LEU51:k.N/1
A1613:1.O5'/1 3.22 ALA2:k.N/1
G1618:1.OP1/1 2.53 LYS6:n.O/1
C1639:1.OP1/1 3.13 GLN52:g.N/1
C1639:1.OP2/1 2.69 CYS81:g.O/1
G1653:1.OP2/1 3.14 LYS371:I.N/1
G1653:1.O2'/1 3.38 LYS43:g.N/1
G1677:1.OP1/1 3.09 ASN101:U.N/1
G1678:1.OP1/1 2.28 SER97:U.N/1
G1678:1.OP1/1 3.08 SER97:U.O/1
A1683:1.OP2/1 3.2 LYS85:U.O/1
C1690:1.OP1/1 2.96 HIS58:R.O/1
G1718:1.OP1/1 1.72 HIS118:R.O/1
C1793:1.OP2/1 2.92 LYS362:I.N/1
C1802:1.O2'/1 1.09 PRO59:g.O/1
A1804:1.O2'/1 1.86 GLY78:g.O/1
A1806:1.OP1/1 1.67 TYR76:g.N/1
U1821:1.O2'/1 1.72 LYS67:g.N/1
G1829:1.O2'/1 2.29 MET1:n.N/1
U1831:1.OP1/1 3.39 LYS92:X.N/1
C1857:1.O2'/1 3.41 VAL5:g.N/1
G1875:1.OP1/1 2.9 LYS19:R.N/1
G1875:1.OP2/1 3.09 LYS19:R.N/1
G1897:1.O2'/1 2.93 GLY16:V.O/1
U2127:1.O3'/1 2.66 THR183:w.O/1
U2127:1.O2'/1 2.63 THR183:w.O/1
U2327:1.O2'/1 3.01 ASN190:w.O/1
C2350:1.O3'/1 2.9 GLY68:P.N/1
U2351:1.OP1/1 2.91 GLY68:P.N/1
U2351:1.O3'/1 3.19 TRP83:P.N/1
A2352:1.O3'/1 2.72 ALA85:P.N/1
A2352:1.O3'/1 3.32 LYS86:P.N/1
G2353:1.OP1/1 2.44 LYS86:P.N/1
C2359:1.OP1/1 3.04 GLY800:w.N/1
G2370:1.OP1/1 2.83 THR13:s.N/1
C2383:1.OP1/1 3.35 PHE71:O.N/1
U2428:1.O3'/1 2.35 GLY413:q.O/1
U2428:1.O2'/1 1.88 ILE412:q.O/1
U2428:1.O2'/1 2.51 GLY413:q.O/1
G2602:1.O2'/1 2.71 LYS410:q.O/1
U2826:1.O2'/1 2.72 THR31:b.O/1
U2826:1.O2'/1 2.33 ILE33:b.N/1
U2827:1.O4'/1 2.57 THR31:b.O/1
G2828:1.OP1/1 2.89 THR25:b.O/1
G2830:1.O4'/1 2.24 ARG130:b.O/1
G2856:1.O2'/1 2.55 THR192:r.N/1
U2891:1.O3'/1 2.81 ALA2:z.N/1
U2891:1.O2'/1 2.71 ALA2:z.N/1
U2891:1.O2'/1 3.05 ALA2:z.O/1
G2898:1.O2'/1 3.02 GLN155:b.O/1
U2916:1.O3'/1 3.18 ARG45:V.O/1
G2917:1.OP1/1 2.75 ASN47:V.N/1
C2928:1.O2'/1 2.65 VAL124:w.O/1
C2929:1.O4'/1 3.09 GLY125:w.O/1
U2932:1.OP1/1 2.66 GLY41:V.N/1
U2989:1.O2'/1 2.63 ALA267:B.O/1
G2990:1.OP1/1 3.08 ARG19:B.N/1
A2991:1.OP1/1 3.37 ARG21:B.N/1
A3000:1.O2'/1 3.04 PHE118:B.O/1
C3004:1.O2'/1 2.85 LEU99:B.O/1
A3008:1.OP1/1 2.92 HIS72:O.N/1
A3008:1.O3'/1 3.18 LYS66:O.O/1
G3009:1.O2'/1 2.78 LEU14:B.O/1
U3013:1.OP2/1 2.74 LEU5:z.N/1
G3015:1.OP2/1 2.36 ALA2:z.N/1
U3037:1.O2'/1 3.08 GLY410:b.O/1
C3039:1.O2'/1 2.24 LYS10:V.O/1
U3047:1.OP1/1 3.39 GLY330:B.N/1
U3058:1.OP2/1 3.22 GLY22:d.N/1
G3075:1.OP1/1 3.02 ARG62:d.O/1
A3087:1.OP1/1 3.47 GLY366:B.N/1
A3113:1.O2'/1 2.76 ALA66:H.O/1
A3130:1.OP1/1 2.76 SER8:z.N/1
C3132:1.O4'/1 2.78 MET1:s.N/1
U3138:1.OP1/1 3.12 SER274:B.O/1
U3138:1.O2'/1 2.79 LEU17:B.O/1
G3149:1.O2'/1 2.9 ALA129:B.O/1
A3150:1.OP1/1 3.06 TYR133:B.N/1
G3176:1.OP2/1 3.33 HIS5:f.N/1
A3186:1.O2'/1 3.13 VAL43:H.O/1
A3187:1.OP2/1 2.54 SER22:H.O/1
G3216:1.OP1/1 3.11 SER162:E.N/1
G3229:1.O3'/1 3.11 LYS132:M.O/1
A3267:1.O2'/1 2.8 GLY73:E.O/1
A3274:1.OP1/1 3.15 GLY45:E.N/1
A3295:1.OP2/1 2.93 LYS126:B.N/1
A3296:1.OP1/1 2.86 LYS120:B.N/1
C3308:1.O2'/1 2.14 ARG69:P.O/1
G3309:1.O5'/1 2.44 ARG69:P.O/1
C3324:1.OP1/1 3.38 ASN15:d.N/1
C3324:1.O5'/1 2.68 THR13:d.O/1
C3324:1.O5'/1 3.37 ASN15:d.N/1
C3324:1.O2'/1 3.11 THR13:d.N/1
A3376:1.O2'/1 2.26 LYS18:d.O/1
C3378:1.O2'/1 2.89 HIS313:B.N/1
U3384:1.O2'/1 2.09 THR106:d.O/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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