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Nucleic atom dist Protein atom
DC-54:I.OP1/1 2.89 SER53:D.N/1
DA-53:I.OP1/1 3.23 ILE51:D.N/1
DA-53:I.OP2/1 2.92 ILE51:D.O/1
DC-52:I.OP2/1 3.22 TYR39:D.OH/1
DA-43:I.OP1/1 3.04 ARG17:C.N/1
DA-43:I.OP2/1 2.58 ARG17:C.NE/1
DG-42:I.OP1/1 2.91 ARG20:C.NE/1
DG-42:I.OP1/1 2.63 ARG20:C.NH2/1
DA-34:I.OP1/1 3.18 SER84:D.N/1
DA-34:I.OP1/1 2.99 THR85:D.OG1/1
DG-33:I.OP2/1 3.15 ARG83:D.NH2/1
DT-23:I.OP1/1 2.88 ARG72:A.NH1/1
DT-23:I.OP1/1 2.86 PHE84:A.N/1
DT-23:I.OP2/1 2.84 ARG72:A.NH2/1
DG-22:I.OP2/1 2.71 LYS20:B.NZ/1
DA-13:I.OP1/1 3.01 ARG36:B.NH1/1
DA-13:I.OP1/1 3.05 ARG36:B.NH2/1
DA-13:I.OP2/1 2.88 ARG36:B.NH1/1
DA-3:I.OP1/1 2.7 VAL117:A.N/1
DC7:I.OP1/1 3.14 SER47:F.OG/1
DC7:I.O5'/1 3.05 ILE46:F.O/1
DG8:I.OP1/1 2.48 ILE46:F.N/1
DG8:I.OP1/1 2.86 ILE46:F.O/1
DT9:I.OP1/1 2.88 GLY44:E.N/1
DA17:I.OP1/1 3.25 ARG69:E.NH2/1
DG18:I.OP1/1 2.9 LYS64:E.N/1
DG18:I.OP2/1 2.99 LEU65:E.N/1
DA26:I.O3'/1 2.83 ARG83:E.NH2/1
DG27:I.OP1/1 2.52 ARG83:E.NH1/1
DA28:I.OP1/1 2.6 LYS79:F.N/1
DA28:I.OP1/1 2.81 THR80:F.N/1
DC30:I.OP1/1 2.34 THR29:D.OG1/1
DG38:I.OP1/1 2.68 ALA45:G.N/1
DG38:I.O4'/1 2.67 ARG42:G.NH2/1
DA39:I.OP1/1 3.42 VAL43:G.N/1
DC49:I.OP1/1 2.99 ARG29:G.NH2/1
DG57:I.O3'/1 2.93 ARG77:G.NH1/1
DC58:I.OP1/1 2.91 THR76:G.N/1
DC58:I.OP1/1 2.99 THR76:G.OG1/1
DA59:I.OP2/1 2.78 LYS75:G.NZ/1
DA72:I.OP1/1 2.38 LYS37:A.NZ/1
DA-54:J.OP1/1 3.31 SER53:H.N/1
DG-53:J.OP1/1 2.96 ILE51:H.N/1
DG-52:J.OP2/1 2.65 TYR39:H.OH/1
DT-47:J.O3'/1 3.31 ARG30:H.NH2/1
DT-43:J.OP2/1 2.49 ARG17:G.NE/1
DT-42:J.OP1/1 3.1 ARG20:G.NE/1
DT-42:J.OP1/1 2.57 ARG20:G.NH2/1
DG-34:J.OP1/1 2.84 SER84:H.N/1
DG-34:J.OP1/1 3.06 THR85:H.OG1/1
DC-23:J.OP1/1 3.03 ARG72:E.NH1/1
DC-23:J.OP1/1 2.75 PHE84:E.N/1
DC-23:J.OP2/1 2.97 ARG72:E.NH2/1
DA-13:J.OP1/1 3.25 ARG36:F.NH2/1
DA-13:J.OP2/1 3 ARG36:F.NH1/1
DG-3:J.OP1/1 3.24 THR118:E.N/1
DC7:J.OP1/1 2.43 SER47:B.OG/1
DC7:J.OP1/1 2.63 GLY48:B.N/1
DC8:J.OP1/1 2.44 ILE46:B.N/1
DC8:J.OP1/1 2.94 ILE46:B.O/1
DG9:J.OP1/1 3.08 GLY44:A.N/1
DG9:J.OP1/1 3.4 ALA47:A.N/1
DC10:J.OP1/1 2.68 TYR41:A.N/1
DA17:J.OP1/1 2.66 ARG69:A.NH2/1
DC18:J.OP1/1 3.01 LYS64:A.N/1
DC18:J.OP2/1 3.11 LEU65:A.N/1
DG28:J.OP1/1 2.49 LYS79:B.N/1
DT30:J.OP1/1 2.42 THR29:H.OG1/1
DA39:J.OP1/1 2.39 VAL43:C.N/1
DA39:J.OP1/1 2.84 VAL43:C.O/1
DG48:J.OP1/1 2.49 TYR37:D.OH/1
DC49:J.OP1/1 2.76 ARG29:C.NH2/1
DA50:J.O3'/1 2.87 LYS28:D.N/1
DC51:J.OP1/1 3.18 LYS28:D.N/1
DA57:J.O3'/1 3.41 ARG77:C.NE/1
DG58:J.OP1/1 3.31 THR76:C.N/1
DG58:J.OP1/1 3.36 ARG77:C.N/1
DC70:J.OP1/1 2.34 THR45:E.OG1/1
DT71:J.OP2/1 2.37 ARG42:E.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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