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Nucleic atom dist Protein atom
DA407:B.N3/1 3.18 GLN69:A.NE2/1
DT408:B.OP1/1 3.13 ARG90:A.NH1/1
DT408:B.OP1/1 3.15 ARG90:A.NH2/1
DC409:B.OP1/1 2.95 VAL88:A.N/1
DC409:B.OP1/1 2.64 SER104:A.OG/1
DG428:C.OP1/1 2.9 LYS52:A.NZ/1
DG428:C.OP2/1 3.09 ASN168:A.N/1
DG428:C.OP2/1 2.76 ARG252:A.NH2/1
DA429:C.OP1/1 2.76 HIS67:A.NE2/1
DA429:C.OP2/1 2.68 LYS52:A.NZ/1
DA430:C.OP2/1 3.08 ARG124:A.NE/1
DA430:C.OP2/1 2.41 ARG124:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA426:C.OP2/1 2.55 503:C/1 3.03 LYS246:A.NZ/1
DG428:C.OP2/1 2.72 404:A/1 2.31 ARG252:A.NH1/1
DA429:C.OP2/1 2.54 502:C/1 2.56 LEU158:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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