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Nucleic atom dist Protein atom
DC7:C.OP1/1 2.34 SER38:B.OG/1
DC7:C.OP1/1 2.44 SER38:A.OG/1
DC7:C.OP2/1 2.97 TRP49:B.NE1/1
DC7:C.OP2/1 3.08 TRP49:A.NE1/1
DC7:C.O2/1 2.88 ASN43:B.N/1
DC7:C.O2/1 2.93 ASN43:A.N/1
DG8:C.OP1/1 2.75 THR45:B.OG1/1
DG8:C.OP1/1 3.32 SER46:B.N/1
DG8:C.OP1/1 2.85 THR45:A.OG1/1
DG8:C.OP1/1 3.28 SER46:A.N/1
DG8:C.OP2/1 3.08 LYS116:B.NZ/1
DG8:C.OP2/1 3.03 LYS116:A.NZ/1
DG9:C.N2/1 3.19 TYR41:A.O/1
DG9:C.N2/1 3.07 TYR41:B.O/1
DA11:C.OP1/1 3.21 GLN21:A.N/1
DA11:C.OP1/1 2.9 GLN21:B.N/1
DG12:C.OP1/1 2.09 SER22:A.OG/1
DG12:C.OP1/1 2.99 LYS24:A.N/1
DG12:C.OP1/1 2.04 SER22:B.OG/1
DG12:C.OP1/1 2.9 THR23:B.N/1
DG12:C.OP1/1 2.91 LYS24:B.N/1
DC7:D.OP1/1 2.84 SER38:A.OG/1
DC7:D.OP1/1 2.93 SER38:B.OG/1
DC7:D.OP2/1 2.64 TRP49:A.NE1/1
DC7:D.OP2/1 2.74 TRP49:B.NE1/1
DC7:D.O2/1 3.04 ASN43:A.N/1
DC7:D.O2/1 3.04 ASN43:B.N/1
DG8:D.OP1/1 2.75 THR45:A.OG1/1
DG8:D.OP1/1 2.77 THR45:B.OG1/1
DG8:D.OP2/1 2.62 LYS116:A.NZ/1
DG8:D.OP2/1 2.62 LYS116:B.NZ/1
DG9:D.N2/1 3.33 TYR41:B.O/1
DG9:D.N2/1 3.01 TYR41:A.O/1
DC11:D.OP1/1 2.97 GLN21:B.N/1
DC11:D.OP1/1 2.71 GLN21:A.N/1
DT12:D.OP1/1 2.96 SER22:B.OG/1
DT12:D.OP1/1 2.77 LYS24:B.N/1
DT12:D.OP1/1 2.82 SER22:A.OG/1
DT12:D.OP1/1 2.98 THR23:A.N/1
DT12:D.OP1/1 2.65 LYS24:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC7:C.OP2/1 2.6 208:B/1 2.81 THR45:B.OG1/1
DC7:C.OP2/1 2.6 208:B/1 3.03 LYS116:B.NZ/1
DC7:C.OP2/1 2.6 208:B/1 2.57 TYR117:B.OH/1
DC7:C.OP2/1 2.55 104:C/1 2.59 THR45:A.OG1/1
DC7:C.OP2/1 2.55 104:C/1 3.12 LYS116:A.NZ/1
DC7:C.OP2/1 2.55 104:C/1 2.67 TYR117:A.OH/1
DG8:C.OP1/1 2.45 103:C/1 2.58 SER46:B.OG/1
DG8:C.OP1/1 2.45 103:C/1 2.99 LYS115:B.NZ/1
DG8:C.OP1/1 2.37 102:C/1 2.68 SER46:A.OG/1
DG8:C.N2/1 3.26 233:B/1 2.73 ASN43:B.ND2/1
DT10:C.O2/1 2.78 108:C/1 3 GLY40:A.O/1
DC7:D.OP2/1 2.92 104:C/1 2.59 THR45:A.OG1/1
DC7:D.OP2/1 2.92 104:C/1 3.12 LYS116:A.NZ/1
DC7:D.OP2/1 2.92 104:C/1 2.67 TYR117:A.OH/1
DC7:D.OP2/1 2.75 208:B/1 2.81 THR45:B.OG1/1
DC7:D.OP2/1 2.75 208:B/1 3.03 LYS116:B.NZ/1
DC7:D.OP2/1 2.75 208:B/1 2.57 TYR117:B.OH/1
DG8:D.OP1/1 2.72 102:C/1 2.68 SER46:A.OG/1
DG8:D.OP1/1 2.74 103:C/1 2.58 SER46:B.OG/1
DG8:D.OP1/1 2.74 103:C/1 2.99 LYS115:B.NZ/1
DG8:D.N2/1 3.27 107:C/1 2.84 ASN43:A.ND2/1
DT10:D.O2/1 2.8 116:D/1 3.05 GLY40:B.O/1
DC11:D.OP1/1 2.66 113:D/1 2.87 SER20:A.OG/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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