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Nucleic atom dist Protein atom
DC9:J.OP1/1 2.74 LYS56:E.NZ/1
DA19:J.O3'/1 2.99 ARG77:C.NH1/1
DT21:J.OP2/1 3.11 TYR42:D.OH/1
DT26:J.O3'/1 2.97 ARG30:D.NH2/1
DC27:J.OP1/1 2.9 ARG30:D.NE/1
DC27:J.OP1/1 2.96 ARG30:D.NH2/1
DT29:J.OP1/1 2.89 GLU35:D.OE2/1
DT31:J.OP1/1 2.69 ARG17:C.N/1
DG32:J.OP1/1 3.17 ARG20:C.NH2/1
DT33:J.OP1/1 2.95 ARG11:C.N/1
DG40:J.OP1/1 3.2 SER87:D.N/1
DG40:J.OP1/1 2.61 THR88:D.OG1/1
DT41:J.OP2/1 3.38 ARG86:D.NH1/1
DA51:J.OP1/1 3.12 PHE84:A.N/1
DC61:J.OP1/1 2.58 ARG63:A.NH1/1
DC61:J.OP1/1 3.19 ARG36:B.NH1/1
DG66:J.N2/1 3.06 ARG40:A.NH2/1
DA69:J.OP1/1 2.8 ARG42:A.NH1/1
DT71:J.OP1/1 2.97 VAL117:A.N/1
DT71:J.OP1/1 3.09 THR118:A.N/1
DC81:J.OP1/1 3.39 GLY48:F.N/1
DT82:J.OP1/1 3.21 ILE46:F.N/1
DT83:J.OP1/1 2.99 GLY44:E.N/1
DT83:J.O2/1 3.25 ARG40:E.NH2/1
DG91:J.OP1/1 2.63 ARG69:E.NH2/1
DG91:J.O3'/1 3.2 ARG63:E.NH2/1
DG92:J.OP2/1 3.2 LEU65:E.N/1
DC95:J.OP1/1 2.26 SER904:O.OG/1
DC95:J.OP1/1 2.98 LYS905:O.N/1
DC95:J.OP1/1 3.12 LEU906:O.N/1
DC95:J.OP2/1 3.14 LYS905:O.N/1
DC97:J.OP1/1 2.73 LYS900:O.NZ/1
DC97:J.OP1/1 2.65 ASN1186:O.ND2/1
DC97:J.O5'/1 3.01 ASN1186:O.OD1/1
DC98:J.OP1/1 2.88 ASN929:O.OD1/1
DC98:J.OP1/1 2.58 ASN929:O.ND2/1
DC99:J.OP1/1 2.75 ARG1224:O.NH1/1
DA102:J.OP1/1 3.4 ARG83:E.NH1/1
DA102:J.OP1/1 2.63 THR80:F.OG1/1
DG103:J.OP1/1 2.81 ARG78:F.NH2/1
DC105:J.OP1/1 3.19 THR32:D.OG1/1
DG112:J.O4'/1 3.14 ARG42:G.NH2/1
DA113:J.OP1/1 2.86 VAL43:G.O/1
DC118:J.O4'/1 2.45 LYS13:G.NZ/1
DC118:J.O2/1 2.77 LYS13:G.NZ/1
DT122:J.OP1/1 2.73 TYR40:H.OH/1
DC123:J.OP1/1 2.94 ARG29:G.NH2/1
DG124:J.OP1/1 2.58 LYS34:H.N/1
DG124:J.OP1/1 2.99 LYS34:H.O/1
DG145:J.OP1/1 2.92 THR45:A.OG1/1
DA146:J.OP2/1 3.38 ARG42:A.NH2/1
DA7:I.OP1/1 2.89 ARG49:A.NH1/1
DG18:I.O5'/1 3.25 ARG77:G.NH1/1
DG25:I.O3'/1 2.55 ARG30:H.NH2/1
DA26:I.OP1/1 3.25 ARG30:H.NE/1
DA26:I.OP1/1 3.04 ARG30:H.NH2/1
DA26:I.N3/1 3 ARG33:H.NH2/1
DC27:I.O4'/1 3.02 ARG33:H.NH1/1
DG30:I.OP1/1 3.24 ARG17:G.N/1
DA31:I.OP1/1 2.95 ALA14:G.O/1
DA31:I.OP1/1 2.42 ARG20:G.NH2/1
DG40:I.OP2/1 2.83 ARG86:H.NH1/1
DG49:I.O4'/1 3.06 ARG83:E.NH2/1
DG50:I.N2/1 3.05 ASN1050:O.ND2/1
DG50:I.N3/1 3.04 ASN1050:O.ND2/1
DG52:I.OP1/1 3.01 LYS1057:O.NZ/1
DG53:I.OP1/1 2.65 THR1113:O.OG1/1
DG53:I.OP1/1 2.87 GLN1114:O.OE1/1
DG53:I.OP2/1 2.68 GLN1114:O.NE2/1
DA55:I.OP1/1 3.24 ARG1142:O.NH2/1
DA55:I.OP1/1 2.95 GLY1166:O.N/1
DA55:I.OP2/1 2.34 ARG1142:O.NH1/1
DC56:I.OP1/1 3.2 SER826:O.OG/1
DC57:I.OP1/1 2.69 TYR875:O.OH/1
DC58:I.OP2/1 3 ARG854:O.NH2/1
DT61:I.OP1/1 2.93 ARG36:F.NH1/1
DA71:I.OP1/1 2.47 VAL117:E.N/1
DA71:I.OP1/1 3.07 THR118:E.N/1
DC82:I.OP1/1 3.02 ILE46:B.N/1
DC82:I.OP2/1 2.53 ARG35:B.NH1/1
DG83:I.OP1/1 2.87 GLY44:A.N/1
DG83:I.N2/1 3.51 ARG40:A.NH1/1
DG83:I.N3/1 2.88 ARG40:A.NH2/1
DA84:I.OP1/1 2.96 TYR41:A.N/1
DA91:I.OP1/1 2.45 ARG69:A.NH2/1
DC92:I.OP1/1 3.17 LYS64:A.N/1
DC92:I.OP2/1 3.46 LEU65:A.N/1
DA102:I.OP1/1 2.87 LYS79:B.N/1
DA102:I.OP1/1 3.11 THR80:B.OG1/1
DA103:I.OP2/1 3.32 ARG78:B.NH2/1
DC104:I.O5'/1 2.68 THR32:H.OG1/1
DC104:I.O4'/1 2.95 ARG29:H.NH2/1
DA113:I.OP1/1 2.97 VAL43:C.N/1
DA113:I.OP2/1 2.63 ARG35:C.NH1/1
DA122:I.OP1/1 2.48 TYR40:D.OH/1
DG123:I.OP1/1 3.07 ARG29:C.NH1/1
DG123:I.OP1/1 2.89 ARG29:C.NH2/1
DA133:I.OP1/1 2.81 THR76:C.N/1
DA133:I.OP1/1 2.36 THR76:C.OG1/1
DG145:I.OP1/1 2.8 ARG42:E.N/1
DG145:I.OP1/1 3.23 THR45:E.OG1/1
DG145:I.OP2/1 2.8 ARG42:E.NE/1
DG145:I.OP2/1 2.8 ARG42:E.NH2/1
DA146:I.O3'/1 3.38 LYS37:E.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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