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Nucleic atom dist Protein atom
DC6:F.OP1/1 3.16 LYS374:C.NZ/1
DC7:F.OP1/1 2.65 LYS353:C.NZ/1
DT8:F.OP1/1 2.71 ARG284:C.NE/1
DT8:F.OP1/1 3.1 ARG284:C.NH2/1
DT9:F.OP1/1 2.62 GLY285:C.N/1
DC20:F.OP1/1 2.8 THR473:C.OG1/1
DC20:F.O3'/1 2.94 TYR501:C.OH/1
DA21:F.OP1/1 2.53 HIS361:C.NE2/1
DA21:F.OP1/1 2.82 TYR501:C.OH/1
DC22:F.OP2/1 2.95 ALA360:C.N/1
DG29:F.OP1/1 3.18 ASN255:C.ND2/1
DG31:F.OP1/1 2.82 LYS263:C.NZ/1
DG32:F.N2/1 3.01 TYR183:C.OH/1
DG32:F.N3/1 2.65 TYR183:C.OH/1
DG33:F.O3'/1 2.71 ASP185:C.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC7:F.OP2/1 2.61 105:F/1 2.74 ALA355:C.N/1
DT8:F.OP1/1 2.6 103:F/1 3.16 ARG277:C.O/1
DT8:F.OP1/1 2.6 103:F/1 3.24 ARG277:C.NH1/1
DT8:F.OP1/1 2.6 103:F/1 2.61 ARG284:C.NH2/1
DC23:F.OP1/1 2.92 613:D/1 2.75 GLN394:D.OE1/1
DC23:F.OP1/1 2.92 613:D/1 2.78 LYS395:D.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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