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Nucleic atom dist Protein atom
3DR10:D.OP1/1 2.92 HIS115:A.NE2/1
3DR10:D.OP2/1 3.1 GLU142:A.OE1/1
3DR10:D.OP2/1 2.95 HIS182:A.NE2/1
DC11:D.OP1/1 2.42 ASN273:A.ND2/1
DC11:D.OP2/1 2.25 TYR81:A.OH/1
DG12:D.OP1/1 3.22 HIS8:A.N/1
DG12:D.OP2/1 3 HIS8:A.N/1
DG9:E.OP1/1 3.4 ALA52:A.N/1
DC13:E.OP1/1 2.3 LYS147:A.N/1
DC13:E.OP1/1 3.1 HIS148:A.N/1
DC13:E.OP2/1 2.95 HIS149:A.NE2/1
DG14:E.OP2/1 2.72 HIS148:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC9:C.OP1/1 2.44 101:C/1 3.27 HIS233:A.N/1
DA12:E.OP1/1 2.56 102:E/1 2.92 ALA118:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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